RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC8A2Q9UPR5 921 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 HS3ST4Q9Y661 456 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 CACNA1GO43497 2377 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 HELZP42694 1942 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 A0A1B0GVM2 712 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 TCAF2A6NFQ2 919 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 SOWAHDA6NJG2 315 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 BTNL10A8MVZ5 291 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 FGF10O15520 208 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 ATMINO43313 823 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 KRT86O43790 486 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 MTA2O94776 668 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 PROSCO94903 275 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 CCDC175P0C221 793 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 POLR2EP19388 210 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 ARL4AP40617 200 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 CETN2P41208 172 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RPS9P46781 194 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 VAV2P52735 878 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 CDH4P55283 916 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 HDAC4P56524 1084 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 MRPS21P82921 87 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 SULT2A1Q06520 285 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 MESDQ14696 234 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 PON2Q15165 354 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RNF219Q5W0B1 726 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RWDD4Q6NW29 188 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 FBXL22Q6P050 247 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RFWD3Q6PCD5 774 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 CHST9Q7L1S5 443 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 DGLUCYQ7Z3D6 616 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 ANKS1BQ7Z6G8 1248 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 MFN1Q8IWA4 741 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 SYCE1Q8N0S2 351 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 AHI1Q8N157 1196 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 CARNMT1Q8N4J0 409 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RNF10Q8N5U6 811 aaKnown RBP8.53□□□□□ -1.04
SF3A1-208ENST00000485618 NAT16Q8N8M0 369 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 PJA1Q8NG27 643 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 FIBINQ8TAL6 211 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RIN3Q8TB24 985 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 TEKT4Q8WW24 435 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 BHMTQ93088 406 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 RMDN1Q96DB5 314 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 ZYG11BQ9C0D3 744 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 LMAN1LQ9HAT1 526 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 PRDM16Q9HAZ2 1276 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 LTB4R2Q9NPC1 389 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 VANGL2Q9ULK5 521 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 HPCAL4Q9UM19 191 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 USP18Q9UMW8 372 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
SF3A1-208ENST00000485618 DCHS1Q96JQ0 3298 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 ZFHX4Q86UP3 3567 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 GOLGA6L7A0A1B0GV03 622 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 DRGXA6NNA5 263 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 E9PAM4 449 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 H3BRJ5 948 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 SPOPO43791 374 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 LUC7L3O95232 432 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 GJB6O95452 261 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 SP9P0CG40 484 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 RHOQP17081 205 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 MSNP26038 577 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 MIPP30301 263 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 OR1E1P30953 314 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 SOX9P48436 509 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 HCAR3P49019 387 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 HADHBP55084 474 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 ST8SIA6P61647 398 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 PITX1P78337 314 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 CCDC173Q0VFZ6 552 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 KRT81Q14533 505 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 PDK2Q15119 407 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 C5orf22Q49AR2 442 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FAM133BQ5BKY9 247 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 LRRC38Q5VT99 294 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FYB2Q5VWT5 728 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 TRNP1Q6NT89 227 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 SETD3Q86TU7 594 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 C1orf210Q8IVY1 113 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 KCTD6Q8NC69 237 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 KIAA1524Q8TCG1 905 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 WBP2Q969T9 261 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 ACDQ96AP0 544 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 CLDN23Q96B33 292 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 PRMT1Q99873 361 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 MAK16Q9BXY0 300 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FOXQ1Q9C009 403 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms