RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	PAEP	P09466	180 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	ZNF883	P0CG24	379 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	NCAM1	P13591	858 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	PRKCH	P24723	683 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	HOXD9	P28356	352 aa	Predicted RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	SGSH	P51688	502 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	CNGA2	Q16280	664 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	TTI2	Q6NXR4	508 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	RFWD3	Q6PCD5	774 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	SERPINA13P	Q6UXR4	307 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	ZNF843	Q8N446	348 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	ZNF366	Q8N895	744 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	EHBP1	Q8NDI1	1231 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	LMO3	Q8TAP4	145 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	CYB5D2	Q8WUJ1	264 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	SLC35F5	Q8WV83	523 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	DNASE2B	Q8WZ79	361 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	SIPA1	Q96FS4	1042 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	CDC6	Q99741	560 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	SRRT	Q9BXP5	876 aa	Known RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	GTPBP4	Q9BZE4	634 aa	Known RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	CNGB3	Q9NQW8	809 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	WSB2	Q9NYS7	404 aa	Predicted RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	EIF2B4	Q9UI10	523 aa	Known RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	HBS1L	Q9Y450	684 aa	Known RBP	11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550	MGA	Q8IWI9	3026 aa		11.01	□□□□□ -0.65
HMGN1-215	ENST00000485550		A0A1B0GVT2	93 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ACADM	P11310	421 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	HLA-F	P30511	346 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	COPA	P53621	1224 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	CLDN6	P56747	220 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	CETN1	Q12798	172 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	KCNH2	Q12809	1159 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ENPP2	Q13822	863 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	MORC3	Q14149	939 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ADGRF1	Q5T601	910 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	DHRS13	Q6UX07	377 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	DBX2	Q6ZNG2	339 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	CHST9	Q7L1S5	443 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	FAM124A	Q86V42	546 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	CREBRF	Q8IUR6	639 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	FAM217A	Q8IXS0	508 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	PRCC	Q92733	491 aa	Predicted RBP	11	□□□□□ -0.65
HMGN1-215	ENST00000485550	FCRL3	Q96P31	734 aa	Predicted RBP	11	□□□□□ -0.65
HMGN1-215	ENST00000485550	SLC2A11	Q9BYW1	496 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	PRORY	Q9H606	182 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ITM2C	Q9NQX7	267 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ST7	Q9NRC1	585 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	ABCB8	Q9NUT2	735 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	STIM2	Q9P246	746 aa		11	□□□□□ -0.65
HMGN1-215	ENST00000485550	TDRD6	O60522	2096 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	DOCK9	Q9BZ29	2069 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	NPC1	O15118	1278 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TIMM44	O43615	452 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TLX3	O43711	291 aa	Predicted RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TBL1X	O60907	577 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	LTF	P02788	710 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	KRT5	P13647	590 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	SLC6A4	P31645	630 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	EIF2S3	P41091	472 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	PPP1R2	P41236	205 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	CSNK1E	P49674	416 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TPMT	P51580	245 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TBX4	P57082	545 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	EIF4H	Q15056	248 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	FNDC3B	Q53EP0	1204 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	IL27RA	Q6UWB1	636 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	LRRC69	Q6ZNQ3	347 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	METTL3	Q86U44	580 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	TRIM59	Q8IWR1	403 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	SCML4	Q8N228	414 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	WFDC5	Q8TCV5	224 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	SNX19	Q92543	992 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	GOLGA1	Q92805	767 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	KREMEN1	Q96MU8	473 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	INTS2	Q9H0H0	1204 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	MTG2	Q9H4K7	406 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	USP36	Q9P275	1121 aa	Known RBP	10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	GGA2	Q9UJY4	613 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	PLA2G4C	Q9UP65	541 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	SLCO1B1	Q9Y6L6	691 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	HECTD1	Q9ULT8	2610 aa		10.99	□□□□□ -0.65
HMGN1-215	ENST00000485550	BICDL2	A1A5D9	508 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	METTL12	A8MUP2	240 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550		J3QKU1	62 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	KCNK3	O14649	394 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	PMM2	O15305	246 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	P4HA2	O15460	535 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	TNFSF14	O43557	240 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	ACSL4	O60488	711 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	MOCS2	O96007	188 aa	Predicted RBP	10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	AFP	P02771	609 aa	Known RBP	10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	FYN	P06241	537 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	PABPC1	P11940	636 aa	Known RBP	10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	CD70	P32970	193 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	SLC11A2	P49281	568 aa		10.98	□□□□□ -0.65
HMGN1-215	ENST00000485550	ZNF132	P52740	706 aa		10.98	□□□□□ -0.65

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