RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CPXM1Q96SM3 734 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 GTPBP2Q9BX10 602 aaKnown RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 TMEM51Q9NW97 253 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 KIAA1522Q9P206 1035 aaPredicted RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 STIM2Q9P246 746 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 KMT2BQ9UMN6 2715 aaPredicted RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 KNL1Q8NG31 2342 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 KCNU1A8MYU2 1149 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 GJB3O75712 270 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 TACR2P21452 398 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 CSKP41240 450 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 RPS14P62263 151 aaKnown RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 HNRNPA1L2Q32P51 320 aaKnown RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 VWA3BQ502W6 1294 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 ZC3H12AQ5D1E8 599 aaKnown RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 ZNF776Q68DI1 518 aaPredicted RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 C11orf57Q6ZUT1 292 aaPredicted RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 ZDHHC17Q8IUH5 632 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 CARNMT1Q8N4J0 409 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 DEFB124Q8NES8 71 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 ZNF397Q8NF99 534 aaPredicted RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 NUP62CLQ9H1M0 184 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 RSPH9Q9H1X1 276 aaPredicted RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 OSGEPQ9NPF4 335 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 DNAJC12Q9UKB3 198 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 INTS6Q9UL03 887 aaKnown RBP20.54■□□□□ 0.88
HPS4-213ENST00000483631 CEP83Q9Y592 693 aa20.54■□□□□ 0.88
HPS4-213ENST00000483631 ITIH6Q6UXX5 1313 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 TARSL2A2RTX5 802 aaKnown RBP20.53■□□□□ 0.88
HPS4-213ENST00000483631 F5H5T6 163 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 MOCS2O96007 188 aaPredicted RBP20.53■□□□□ 0.88
HPS4-213ENST00000483631 DNTTP04053 509 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 CCR1P32246 355 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 KRT9P35527 623 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 OXCT1P55809 520 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 APBA1Q02410 837 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 DPCR1Q3MIW9 517 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 PITRM1Q5JRX3 1037 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 MIIPQ5JXC2 388 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 USP30Q70CQ3 517 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 SLC26A9Q7LBE3 791 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 CHSY1Q86X52 802 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 FAM71AQ8IYT1 594 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 LGI2Q8N0V4 545 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 C1orf216Q8TAB5 229 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 MYEOVQ96EZ4 313 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 TUBGCP2Q9BSJ2 902 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 BTBD1Q9H0C5 482 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 SGK2Q9HBY8 427 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 RRN3Q9NYV6 651 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 WASF3Q9UPY6 502 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 CABIN1Q9Y6J0 2220 aa20.53■□□□□ 0.88
HPS4-213ENST00000483631 H0Y626 953 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 FOXN3O00409 490 aaPredicted RBP20.52■□□□□ 0.88
HPS4-213ENST00000483631 BCAT2O15382 392 aaPredicted RBP20.52■□□□□ 0.88
HPS4-213ENST00000483631 ZNF883P0CG24 379 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 ABCB4P21439 1286 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 MAOBP27338 520 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 CLCN1P35523 988 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 GRIK2Q13002 908 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 RAP1GAP2Q684P5 730 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 IL27RAQ6UWB1 636 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 OLFML1Q6UWY5 402 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 DEFB106AQ8N104 65 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 ZNF366Q8N895 744 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 C1orf131Q8NDD1 294 aaKnown RBP20.52■□□□□ 0.88
HPS4-213ENST00000483631 MRGPRX3Q96LB0 322 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 PPP1R9BQ96SB3 815 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 PRMT1Q99873 361 aaKnown RBP20.52■□□□□ 0.88
HPS4-213ENST00000483631 FAM204AQ9H8W3 233 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 FSCN3Q9NQT6 498 aa20.52■□□□□ 0.88
HPS4-213ENST00000483631 XPO7Q9UIA9 1087 aaKnown RBP20.52■□□□□ 0.88
HPS4-213ENST00000483631 RNASEH1O60930 286 aaKnown RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 CD59P13987 128 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 CDH5P33151 784 aaPredicted RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 VASPP50552 380 aaPredicted RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 SLC6A3Q01959 620 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 SULT2A1Q06520 285 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 TAF5Q15542 800 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 FSCBQ5H9T9 825 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 RABGAP1LQ5R372 815 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 SLC47A2Q86VL8 602 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 CACUL1Q86Y37 369 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 CFAP52Q8N1V2 620 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 ZCCHC9Q8N567 271 aaKnown RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 DDIT4Q9NX09 232 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 ERVW-1Q9UQF0 538 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 NYNRINQ9P2P1 1898 aaKnown RBP20.51■□□□□ 0.87
HPS4-213ENST00000483631 USP24Q9UPU5 2620 aa20.51■□□□□ 0.87
HPS4-213ENST00000483631 EDDM13A0A1B0GTR0 161 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 A0A1B0GVM2 712 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 TCAF2A6NFQ2 919 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 DAB1O75553 588 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 TRIM16O95361 564 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 SEMA4FO95754 770 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 EEF1GP26641 437 aaKnown RBP20.5■□□□□ 0.87
HPS4-213ENST00000483631 ACSL1P33121 698 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 NOS2P35228 1153 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms