RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CHKAP35790 457 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 MLLT6P55198 1093 aaPredicted RBP11.97□□□□□ -0.49
HPS4-212ENST00000481910 SCAPQ12770 1279 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 HTR4Q13639 388 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 MS4A13Q5J8X5 152 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 CYP4V2Q6ZWL3 525 aaPredicted RBP11.97□□□□□ -0.49
HPS4-212ENST00000481910 MFSD6LQ8IWD5 586 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 YAF2Q8IY57 180 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 ATXN2LQ8WWM7 1075 aaKnown RBP11.97□□□□□ -0.49
HPS4-212ENST00000481910 RSAD2Q8WXG1 361 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 LINC00597Q9H2U6 94 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 DHX35Q9H5Z1 703 aaKnown RBP11.97□□□□□ -0.49
HPS4-212ENST00000481910 IGSF5Q9NSI5 407 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 GPATCH2LQ9NWQ4 482 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 OR12D3Q9UGF7 316 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 PACSIN2Q9UNF0 486 aaPredicted RBP11.97□□□□□ -0.49
HPS4-212ENST00000481910 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 C5orf42Q9H799 3197 aa11.97□□□□□ -0.49
HPS4-212ENST00000481910 GOLGA6L7A0A1B0GV03 622 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 SLC9A3R1O14745 358 aaPredicted RBP11.96□□□□□ -0.49
HPS4-212ENST00000481910 LATS1O95835 1130 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 GGCXP38435 758 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 GNG11P61952 73 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 GRM2Q14416 872 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 PIK3R6Q5UE93 754 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 POLNQ7Z5Q5 900 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 PSTKQ8IV42 348 aaKnown RBP11.96□□□□□ -0.49
HPS4-212ENST00000481910 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 PYROXD2Q8N2H3 581 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 TEKT4Q8WW24 435 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 CD101Q93033 1021 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 C1orf74Q96LT6 269 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 DDX50Q9BQ39 737 aaKnown RBP11.96□□□□□ -0.49
HPS4-212ENST00000481910 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.49
HPS4-212ENST00000481910 DUS2Q9NX74 493 aaKnown RBP11.96□□□□□ -0.49
HPS4-212ENST00000481910 STOML2Q9UJZ1 356 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 WNT6Q9Y6F9 365 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 MYO10Q9HD67 2058 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 XIRP2A4UGR9 3374 aa11.96□□□□□ -0.49
HPS4-212ENST00000481910 PRUNE2Q8WUY3 3088 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 PSTPIP1O43586 416 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 SRGAP2O75044 1071 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 SLC6A4P31645 630 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 CTNNA1P35221 906 aaKnown RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 FCHO2Q0JRZ9 810 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 SFSWAPQ12872 951 aaKnown RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 AUHQ13825 339 aaKnown RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 CA9Q16790 459 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 ODF2Q5BJF6 829 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 PPP6R3Q5H9R7 873 aaPredicted RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 ACBD5Q5T8D3 534 aaPredicted RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 MEI1Q5TIA1 1274 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 RFWD3Q6PCD5 774 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 CHSY1Q86X52 802 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 ADGRG2Q8IZP9 1017 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 SLC35F6Q8N357 371 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 KIAA1958Q8N8K9 716 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 KCTD6Q8NC69 237 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 DEPDC1BQ8WUY9 529 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 OSCP1Q8WVF1 389 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 OTUB2Q96DC9 234 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 ZFYVE19Q96K21 471 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 PLEKHG4BQ96PX9 1271 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 TRMT61BQ9BVS5 477 aaKnown RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.5
HPS4-212ENST00000481910 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 PRKAG3Q9UGI9 489 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 PCDHA3Q9Y5H8 950 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 SNX10Q9Y5X0 201 aa11.96□□□□□ -0.5
HPS4-212ENST00000481910 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 MIF4GDA9UHW6 222 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 LOC730098B7Z3J9 87 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 F5H5T6 163 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 FAM72CH0Y354 149 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 TRDMT1O14717 391 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 ABCB7O75027 752 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 TACR2P21452 398 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 CTNNA2P26232 953 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 STIP1P31948 543 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 L1CAMP32004 1257 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 IFNAR2P48551 515 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 DNA2P51530 1060 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 VCPP55072 806 aaKnown RBP11.95□□□□□ -0.5
HPS4-212ENST00000481910 GPS2Q13227 327 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 FAM72AQ5TYM5 149 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 FAM72DQ6L9T8 149 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 LRRC31Q6UY01 552 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 TPGS1Q6ZTW0 290 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 SRLQ86TD4 932 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 FAM72BQ86X60 149 aa11.95□□□□□ -0.5
HPS4-212ENST00000481910 ADHFE1Q8IWW8 467 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms