RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PTPRBP23467 1997 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 SYNJ2BP-COX16A0A087WUM0 186 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TMEM8BA6NDV4 472 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 FAM47DPA6NHR8 397 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 H0Y626 953 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PAPSS1O43252 624 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 MED7O43513 233 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 LUC7L3O95232 432 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 TRIM16O95361 564 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 FTH1P19P0C7X4 201 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 GNA15P30679 374 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 RDXP35241 583 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 USP8P40818 1118 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 GPD2P43304 727 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 ACADSBP45954 432 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 MARSP56192 900 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 ST8SIA6P61647 398 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 RPS14P62263 151 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 PITX1P78337 314 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 BNC1Q01954 994 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 APBA1Q02410 837 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 ZBTB16Q05516 673 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PDCLQ13371 301 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 NNTQ13423 1086 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 HNRNPDQ14103 355 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 ZNF423Q2M1K9 1284 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 HLA-BQ31612 363 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 DCAF6Q58WW2 860 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 ZC3H12AQ5D1E8 599 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 FSCBQ5H9T9 825 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 MS4A13Q5J8X5 152 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PITRM1Q5JRX3 1037 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 RAP1GAP2Q684P5 730 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TRIM65Q6PJ69 517 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 FOXR2Q6PJQ5 311 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 IL27RAQ6UWB1 636 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 CIR1Q86X95 450 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 PASD1Q8IV76 773 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 LGI2Q8N0V4 545 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PNPLA1Q8N8W4 532 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 ZNF557Q8N988 423 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 FIBINQ8TAL6 211 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 BIRC7Q96CA5 298 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 MYO19Q96H55 970 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 SLC39A13Q96H72 371 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 LMLNQ96KR4 655 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TRIM62Q9BVG3 475 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 BTBD1Q9H0C5 482 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PCED1AQ9H1Q7 454 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PABPC3Q9H361 631 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 FAM204AQ9H8W3 233 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TM9SF3Q9HD45 589 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TM7SF3Q9NS93 570 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 COX16Q9P0S2 106 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 SERGEFQ9UGK8 458 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 INTS6Q9UL03 887 aaKnown RBP6.92□□□□□ -1.3
FN1-220ENST00000480024 CNTN6Q9UQ52 1028 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 MSRB2Q9Y3D2 182 aa6.92□□□□□ -1.3
FN1-220ENST00000480024 A0A1W2PP55 124 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 GOLGA8CPA6NN73 597 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 BECN2A8MW95 431 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 TTC34A8MYJ7 566 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 F5H5T6 163 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 MID1O15344 667 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 CBFA2T3O75081 653 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 SIN3BO75182 1162 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 RNASEH2AO75792 299 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 MOCS3O95396 460 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 FGFR1OPO95684 399 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 TRUB2O95900 331 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 ASLP04424 464 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 SLC9A1P19634 815 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 TACR2P21452 398 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 PSMD8P48556 350 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 STK19P49842 368 aaPredicted RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 YWHAZP63104 245 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 IL9RQ01113 521 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 CENPCQ03188 943 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 TAF5Q15542 800 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 TEAD4Q15561 434 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 CST6Q15828 149 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 CAMK4Q16566 473 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 ARHGAP44Q17R89 818 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 KIF19Q2TAC6 998 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 HNRNPA1L2Q32P51 320 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 RNF219Q5W0B1 726 aaPredicted RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 KIAA0895LQ68EN5 471 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 RAB44Q7Z6P3 723 aaPredicted RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
FN1-220ENST00000480024 APCDD1Q8J025 514 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 C1orf216Q8TAB5 229 aa6.91□□□□□ -1.3
FN1-220ENST00000480024 STK32AQ8WU08 396 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms