RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
SEC13-216ENST00000479868 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 SMC1BQ8NDV3 1235 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 UROC1Q96N76 676 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 PGLYRP2Q96PD5 576 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 KLC4Q9NSK0 619 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 SYBUQ9NX95 663 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 USH1CQ9Y6N9 552 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
SEC13-216ENST00000479868 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 OR4Q2P0C623 313 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CKBP12277 381 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CCNFP41002 786 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 OVGP1Q12889 678 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 MBTPS1Q14703 1052 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CYB5D1Q6P9G0 228 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 DCLRE1AQ6PJP8 1040 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CYS1Q717R9 158 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 CHSY1Q86X52 802 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 RNF34Q969K3 372 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 EPAS1Q99814 870 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 MYLK2Q9H1R3 596 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
SEC13-216ENST00000479868 AOC2O75106 756 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 USP12O75317 370 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 DDHD2O94830 711 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 SKIP12755 728 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 BGNP21810 368 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 SERPINB4P48594 390 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 SLC5A3P53794 718 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 TSPY1Q01534 308 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 NIPAL4Q0D2K0 466 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 CRYMQ14894 314 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 THEM5Q8N1Q8 247 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 SCML4Q8N228 414 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 IQCGQ9H095 443 aaKnown RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 PLLPQ9Y342 182 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 INPPL1O15357 1258 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 NCAM2O15394 837 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 ZBTB24O43167 697 aaPredicted RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 IGLV3-25P01717 112 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 PGAM1P18669 254 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 SP3Q02447 781 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 GALNT2Q10471 571 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 EIF4EBP2Q13542 120 aaPredicted RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 TRAF7Q6Q0C0 670 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 RNF180Q86T96 592 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 OR52K1Q8NGK4 314 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 ERP27Q96DN0 273 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 MTBPQ96DY7 904 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 CELF6Q96J87 481 aaKnown RBP13.35□□□□□ -0.27
SEC13-216ENST00000479868 RGS18Q9NS28 235 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 PCMTD2Q9NV79 361 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 TMEM51Q9NW97 253 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 NEU3Q9UQ49 428 aa13.35□□□□□ -0.27
SEC13-216ENST00000479868 MYO16Q9Y6X6 1858 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 TOP3BO95985 862 aaKnown RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 TYMPP19971 482 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 GRIK1P39086 918 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 KCNJ2P63252 427 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 SPATA2LQ8IUW3 424 aaPredicted RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 RFWD2Q8NHY2 731 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 MECRQ9BV79 373 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 TSSK1BQ9BXA7 367 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 SIK2Q9H0K1 926 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 TRIM33Q9UPN9 1127 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 AP2A1O95782 977 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 SERPINB9P50453 376 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 ELF3P78545 371 aaPredicted RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 FYB2Q5VWT5 728 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 MARK2Q7KZI7 788 aaKnown RBP13.34□□□□□ -0.27
SEC13-216ENST00000479868 NDUFAF2Q8N183 169 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 APBB2Q92870 758 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms