RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 ATP6V1C1P21283 382 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 RPL34P49207 117 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 MFSD10Q14728 455 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PAN2Q504Q3 1202 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 NPWQ8N729 165 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PPP1R14CQ8TAE6 165 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 ULBP1Q9BZM6 244 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PNPOQ9NVS9 261 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 HBS1LQ9Y450 684 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 HTTP42858 3142 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PLXNB2O15031 1838 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 KLF11O14901 512 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 XPO1O14980 1071 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 STRNO43815 780 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 SNNO75324 88 aaPredicted RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 F2P00734 622 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 ZFXP17010 805 aaPredicted RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 DESP17661 470 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 DEUP1Q05D60 604 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 NIPAL4Q0D2K0 466 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 STX3Q13277 289 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 TWF2Q6IBS0 349 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 STRADAQ7RTN6 431 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 MAVSQ7Z434 540 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 C10orf107Q8IVU9 208 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 PLD6Q8N2A8 252 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 STMN2Q93045 179 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 LRRC39Q96DD0 335 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 NPY6RQ99463 290 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 TTC1Q99614 292 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 FRMD8Q9BZ67 464 aaPredicted RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 PPP1R12CQ9BZL4 782 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 LRRC4Q9HBW1 653 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 BATF3Q9NR55 127 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 ZFATQ9P243 1243 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 DNAJC16Q9Y2G8 782 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 SMIM35A0A1B0GVV1 85 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 EEF2KO00418 725 aaKnown RBP11.09□□□□□ -0.63
VPS52-217ENST00000478934 ZMPSTE24O75844 475 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 FGF3P11487 239 aaPredicted RBP11.09□□□□□ -0.63
VPS52-217ENST00000478934 NPR3P17342 541 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 ERCC2P18074 760 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 SLC25A3Q00325 362 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 LRRC36Q1X8D7 754 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 CERCAMQ5T4B2 595 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 MBLAC2Q68D91 279 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 LRRC74BQ6ZQY2 392 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 C3orf58Q8NDZ4 430 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 FBXO41Q8TF61 875 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 C7orf26Q96N11 449 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 DLGAP2Q9P1A6 1054 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
VPS52-217ENST00000478934 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 BAG2O95816 211 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 CD4P01730 458 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 ITGA2BP08514 1039 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 IRF9Q00978 393 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 PDE1BQ01064 536 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 PPP2R5DQ14738 602 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 TEDDM1Q5T9Z0 273 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 ATG16L1Q676U5 607 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 LRRC8BQ6P9F7 803 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 RASSF3Q86WH2 238 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 SIX6OS1Q8N1H7 587 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.09□□□□□ -0.63
VPS52-217ENST00000478934 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 PHC3Q8NDX5 983 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 HIPK4Q8NE63 616 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 CELF6Q96J87 481 aaKnown RBP11.09□□□□□ -0.63
VPS52-217ENST00000478934 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 PANX3Q96QZ0 392 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 HNRNPABQ99729 332 aaKnown RBP11.09□□□□□ -0.63
VPS52-217ENST00000478934 SMOQ99835 787 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 KCNK4Q9NYG8 393 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
VPS52-217ENST00000478934 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms