RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PPP3CAQ08209 521 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 HNRNPA1L2Q32P51 320 aaKnown RBP17.85■□□□□ 0.45
VIM-204ENST00000478746 KMT5BQ4FZB7 885 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 PIK3R6Q5UE93 754 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 BSPRYQ5W0U4 402 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 ARHGAP17Q68EM7 881 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 RFWD3Q6PCD5 774 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 BHLHA9Q7RTU4 235 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 NAV2Q8IVL1 2488 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 GRAMD1CQ8IYS0 662 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 TTC39CQ8N584 583 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 DCBLD1Q8N8Z6 715 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 ZNF557Q8N988 423 aaPredicted RBP17.85■□□□□ 0.45
VIM-204ENST00000478746 SLC4A11Q8NBS3 891 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 WBP1Q96G27 269 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 MMRN2Q9H8L6 949 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 LRRC4Q9HBW1 653 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 STIM2Q9P246 746 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 FZD4Q9ULV1 537 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 GOLGA6L7A0A1B0GV03 622 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 CYSRT1A8MQ03 144 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 MAPK13O15264 365 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 CALUO43852 315 aaPredicted RBP17.84■□□□□ 0.45
VIM-204ENST00000478746 KLRC4O43908 158 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 YEATS4O95619 227 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 ASLP04424 464 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 TRIM49P0CI25 452 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 TRIM49CP0CI26 452 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 RAD23BP54727 409 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 E2F1Q01094 437 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 RHDQ02161 417 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 C9orf64Q5T6V5 341 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 SFMBT2Q5VUG0 894 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 BROXQ5VW32 411 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 KDM7AQ6ZMT4 941 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 SND1Q7KZF4 910 aaKnown RBP eCLIP17.84■□□□□ 0.458e-29■□□□□ 8.7
VIM-204ENST00000478746 ZNF248Q8NDW4 579 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 OR14C36Q8NHC7 312 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 FIBINQ8TAL6 211 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 NAF1Q96HR8 494 aaKnown RBP17.84■□□□□ 0.45
VIM-204ENST00000478746 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
VIM-204ENST00000478746 IRX2Q9BZI1 471 aaPredicted RBP17.84■□□□□ 0.45
VIM-204ENST00000478746 CISHQ9NSE2 258 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 ABCC13Q9NSE7 274 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 FAM13BQ9NYF5 915 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 TPX2Q9ULW0 747 aaKnown RBP17.84■□□□□ 0.45
VIM-204ENST00000478746 COL6A6A6NMZ7 2263 aa17.84■□□□□ 0.45
VIM-204ENST00000478746 TARSL2A2RTX5 802 aaKnown RBP17.83■□□□□ 0.44
VIM-204ENST00000478746 TULP2O00295 520 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 IRAK2O43187 625 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 MSI1O43347 362 aaKnown RBP17.83■□□□□ 0.44
VIM-204ENST00000478746 MT-CO3P00414 261 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 KRT13P13646 458 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 GOT1P17174 413 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 ACP1P24666 158 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 CSKP41240 450 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 SLC11A2P49281 568 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 INTS8Q75QN2 995 aaKnown RBP17.83■□□□□ 0.44
VIM-204ENST00000478746 KANSL1Q7Z3B3 1105 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 MFN1Q8IWA4 741 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 UNC45BQ8IWX7 931 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 CEP57L1Q8IYX8 460 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 MFSD2AQ8NA29 543 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 FAXDC2Q96IV6 333 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 LMLNQ96KR4 655 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 MRGPRX3Q96LB0 322 aa17.83■□□□□ 0.44
VIM-204ENST00000478746 MYO18BQ8IUG5 2567 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3DA0A087WVF3 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3IA0A087WXS9 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3EA0A087X179 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3KA0A087X1G2 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3FA6NER0 549 aaPredicted RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 YJEFN3A6XGL0 299 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 C10orf142B7Z368 130 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3LB9A6J9 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 E7ENQ6 273 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 XPO1O14980 1071 aaKnown RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3HP0C7X1 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TMPRSS3P57727 454 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3GQ6DHY5 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3CQ6IPX1 549 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 PRPF39Q86UA1 669 aaKnown RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 TBC1D3Q8IZP1 549 aaPredicted RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 KDM1BQ8NB78 822 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 ZNF578Q96N58 590 aaPredicted RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 FAM129BQ96TA1 746 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 TMEM8AQ9HCN3 771 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 INTS6Q9UL03 887 aaKnown RBP17.82■□□□□ 0.44
VIM-204ENST00000478746 ERVW-1Q9UQF0 538 aa17.82■□□□□ 0.44
VIM-204ENST00000478746 EDDM13A0A1B0GTR0 161 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 TTC34A8MYJ7 566 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 ACSL4O60488 711 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 MAGEC1O60732 1142 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 ADH1BP00325 375 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 C5AR1P21730 350 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 SLC6A4P31645 630 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms