RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SUN3Q8TAQ9 357 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 THAP4Q8WY91 577 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 SDCCAG3Q96C92 435 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZBTB45Q96K62 511 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 CCDC17Q96LX7 622 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 FYTTD1Q96QD9 318 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 NAP1L4Q99733 375 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 MLXIPQ9HAP2 919 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 ANAPC4Q9UJX5 808 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 AMFRQ9UKV5 643 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 USP22Q9UPT9 525 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 DRG1Q9Y295 367 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 SCAPERQ9BY12 1400 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 ATP10AO60312 1499 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 CAMSAP2Q08AD1 1489 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 GPATCH8Q9UKJ3 1502 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 DEPDC5O75140 1603 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 MYO3AQ8NEV4 1616 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 PTPN23Q9H3S7 1636 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 CEP152O94986 1710 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 TTC3P53804 2025 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 TCRBV5S1A1TA0A578 114 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 H3BNC9 293 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 J3KTA2 159 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 NCAM2O15394 837 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 DNPH1O43598 174 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 SH3BP5O60239 455 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 MYCLP12524 364 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 NTSR1P30989 418 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ADD2P35612 726 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 MTHFSP49914 203 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 CDK7P50613 346 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 SUMO2P61956 95 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 RBMS2Q15434 407 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 KLHL22Q53GT1 634 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 AWAT1Q58HT5 328 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 LVRNQ6Q4G3 990 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZNF813Q6ZN06 617 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 BCDIN3DQ7Z5W3 292 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 MOGAT3Q86VF5 341 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 SAMD14Q8IZD0 417 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 IL17REQ8NFR9 667 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 C16orf52Q8NHV5 167 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 OSR1Q8TAX0 266 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ADAMTS18Q8TE60 1221 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 PIGOQ8TEQ8 1089 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 UBXN10Q96LJ8 280 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZSCAN31Q96LW9 406 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM167BQ9BTA0 163 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 FSCN3Q9NQT6 498 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 RXFP3Q9NSD7 469 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ASIC5Q9NY37 505 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 MTMR4Q9NYA4 1195 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 RRN3Q9NYV6 651 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 KIF17Q9P2E2 1029 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 PDP2Q9P2J9 529 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 STEAP1Q9UHE8 339 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZNF580Q9UK33 172 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 NFU1Q9UMS0 254 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 LZTS1Q9Y250 596 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 SLC27A6Q9Y2P4 619 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 CNTNAP2Q9UHC6 1331 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 YEATS2Q9ULM3 1422 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 KIAA1107Q9UPP5 1409 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 PTPRMP28827 1452 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 NCOA2Q15596 1464 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 CCDC141Q6ZP82 1450 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 LRRC9Q6ZRR7 1453 aa4.6□□□□□ -1.67
CDC42BPA-212ENST00000478573 GXYLT2A0PJZ3 443 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 TAF5LO75529 589 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 CYP19A1P11511 503 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 CD19P15391 556 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 HOXD9P28356 352 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 CCKBRP32239 447 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 COPB1P53618 953 aaKnown RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 PSG6Q00889 435 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZNF91Q05481 1191 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 MTAPQ13126 283 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 GRM4Q14833 912 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 TAF5Q15542 800 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 TIGD6Q17RP2 521 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 ADCK5Q3MIX3 580 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 MTUS2Q5JR59 1369 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 CRELD2Q6UXH1 353 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 MMS22LQ6ZRQ5 1243 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 RAB11FIP2Q7L804 512 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 TTC30AQ86WT1 665 aa4.59□□□□□ -1.67
CDC42BPA-212ENST00000478573 RAB11FIP4Q86YS3 637 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms