RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IKBKEQ14164 716 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PDPK2PQ6A1A2 396 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 LCLAT1Q6UWP7 414 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 TEX9Q8N6V9 391 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 SLC25A13Q9UJS0 675 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 COG5Q9UP83 839 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 LOC102724159A0A0B4J2E5 919 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 A0A0G2JLL6 359 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 SEC24DO94855 1032 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PWP2Q15269 919 aaKnown RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PRRT2Q7Z6L0 340 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PSTKQ8IV42 348 aaKnown RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 ATXN2LQ8WWM7 1075 aaKnown RBP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 SHISA4Q96DD7 197 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 CNGB3Q9NQW8 809 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPHP4-208ENST00000478423 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.088e-6■■■■■ 107
NPHP4-208ENST00000478423 CILPO75339 1184 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 ATP4AP20648 1035 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 BTKQ06187 659 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 ZNF284Q2VY69 593 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 SDHAF4Q5VUM1 108 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 ZCCHC23Q6ZST2 131 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 MYO1HQ8N1T3 1032 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 NETO2Q8NC67 525 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 MAF1Q9H063 256 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PDZD7Q9H5P4 517 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
NPHP4-208ENST00000478423 H2AFYO75367 372 aaKnown RBP14.52□□□□□ -0.08
NPHP4-208ENST00000478423 SERPINE1P05121 402 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 TFE3P19532 575 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-208ENST00000478423 EEF1DP29692 281 aaKnown RBP14.52□□□□□ -0.08
NPHP4-208ENST00000478423 HNRNPH1P31943 449 aaKnown RBP14.52□□□□□ -0.08
NPHP4-208ENST00000478423 MMP13P45452 471 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 JAM2P57087 298 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 LRRC74AQ0VAA2 488 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 PLD1Q13393 1074 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 RRM2BQ7LG56 351 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 GALNT4Q8N4A0 578 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 DNAJC9Q8WXX5 260 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 ZNF75CPQ92670 426 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-208ENST00000478423 ART4Q93070 314 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 EMILIN2Q9BXX0 1053 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 DUSP16Q9BY84 665 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 LRRC37A3O60309 1634 aa14.52□□□□□ -0.08
NPHP4-208ENST00000478423 ERBB2P04626 1255 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 TPBGLP0DKB5 382 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 TUSC3Q13454 348 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 RAP1GAP2Q684P5 730 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 SDE2Q6IQ49 451 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 NEPROQ6NW34 567 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 UBA2Q9UBT2 640 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-208ENST00000478423 SEPT3Q9UH03 358 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 PLA2G4CQ9UP65 541 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 R3HDM2Q9Y2K5 976 aaKnown RBP14.52□□□□□ -0.09
NPHP4-208ENST00000478423 DNAJC8O75937 253 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-208ENST00000478423 ZBTB48P10074 688 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-208ENST00000478423 TOP6BLQ8N6T0 577 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 LENG1Q96BZ8 264 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-208ENST00000478423 CPNE1Q99829 537 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 RGS18Q9NS28 235 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 V9GYQ6 96 aa14.52□□□□□ -0.09
NPHP4-208ENST00000478423 SLCO1B7G3V0H7 640 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 PHGDHO43175 533 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 BANF1O75531 89 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 FKBP9O95302 570 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 CALB2P22676 271 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 NME5P56597 212 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 KLC1Q07866 573 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 MTA1Q13330 715 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 C16orf46Q6P387 395 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 FKBP9P1Q75LS8 142 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 VPS37AQ8NEZ2 397 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 LZICQ8WZA0 190 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 POLR1EQ9GZS1 481 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 PRDM16Q9HAZ2 1276 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 STX18Q9P2W9 335 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 SPEF2Q9C093 1822 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 XPO1O14980 1071 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TSPAN1O60635 241 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 NFKB1P19838 968 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 CCDC15Q0P6D6 951 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TBC1D19Q8N5T2 526 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DACT3Q96B18 629 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 UROC1Q96N76 676 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TBL1YQ9BQ87 522 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 FTHL17Q9BXU8 183 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 SLC27A5Q9Y2P5 690 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DERAQ9Y315 318 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 EVPLLA8MZ36 301 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 NT5C1B-RDH14C9J2C7 533 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 FGF10O15520 208 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DHX15O43143 795 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 LRCH4O75427 683 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms