RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 OPTNQ96CV9 577 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 MPP4Q96JB8 637 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 B3GALT6Q96L58 329 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 PCDH18Q9HCL0 1135 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 PLLPQ9Y342 182 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 ZNF711Q9Y462 761 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 HEMK1Q9Y5R4 338 aaPredicted RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 PYGLP06737 847 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 SFT2D3Q587I9 215 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 CES4AQ5XG92 561 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 DEFB106AQ8N104 65 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 PLD6Q8N2A8 252 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 PARP8Q8N3A8 854 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 OR6P1Q8NGX9 317 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 RPL10LQ96L21 214 aaKnown RBP10.02□□□□□ -0.81
CMC1-209ENST00000477739 TBCBQ99426 244 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 FERMT1Q9BQL6 677 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 SLC39A3Q9BRY0 314 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 FOXP3Q9BZS1 431 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 PRDM12Q9H4Q4 367 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 SOX13Q9UN79 622 aa10.02□□□□□ -0.81
CMC1-209ENST00000477739 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 IGKV6D-21A0A0A0MT36 114 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 HMBSP08397 361 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 ARF4P18085 180 aaPredicted RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 PMLP29590 882 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 MRPS5P82675 430 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 PARP6Q2NL67 630 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 CCDC14Q49A88 953 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 LRRC38Q5VT99 294 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 MYLK4Q86YV6 388 aaPredicted RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 RNF217Q8TC41 542 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 MIPOL1Q8TD10 442 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 MAGEC3Q8TD91 643 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 KCNK13Q9HB14 408 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 ADARB2Q9NS39 739 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 KRT82Q9NSB4 513 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 LNPEPQ9UIQ6 1025 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 A0A096LPK6 155 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 SLC15A5A6NIM6 579 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 NDC80O14777 642 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 LTFP02788 710 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 ABHD2P08910 425 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 PIRTP0C851 137 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 NCAM1P13591 858 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 CPA3P15088 417 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 GNAZP19086 355 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 STIP1P31948 543 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 ADCYAP1R1P41586 468 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 IL1RL1Q01638 556 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 OCRLQ01968 901 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 SLC10A2Q12908 348 aaPredicted RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 NOL9Q5SY16 702 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 TWF2Q6IBS0 349 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 TSHZ1Q6ZSZ6 1077 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 FRMD7Q6ZUT3 714 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 TRIML2Q8N7C3 387 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 PIWIL2Q8TC59 973 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 EME1Q96AY2 570 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 ALKBH8Q96BT7 664 aaKnown RBP10.01□□□□□ -0.81
CMC1-209ENST00000477739 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 OR52B2Q96RD2 323 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 ECSITQ9BQ95 431 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 RHOBTB2Q9BYZ6 727 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 CHRAC1Q9NRG0 131 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 SSX2IPQ9Y2D8 614 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 SNX13Q9Y5W8 968 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 NUP205Q92621 2012 aa10.01□□□□□ -0.81
CMC1-209ENST00000477739 MAGEA13PA6NCF6 341 aa10□□□□□ -0.81
CMC1-209ENST00000477739 ASB14A6NK59 587 aa10□□□□□ -0.81
CMC1-209ENST00000477739 HNRNPRO43390 633 aaKnown RBP10□□□□□ -0.81
CMC1-209ENST00000477739 MFSD11O43934 449 aa10□□□□□ -0.81
CMC1-209ENST00000477739 SIN3BO75182 1162 aa10□□□□□ -0.81
CMC1-209ENST00000477739 ZNF132P52740 706 aa10□□□□□ -0.81
CMC1-209ENST00000477739 RBP5P82980 135 aa10□□□□□ -0.81
CMC1-209ENST00000477739 PRKD1Q15139 912 aaPredicted RBP10□□□□□ -0.81
CMC1-209ENST00000477739 NOMO1Q15155 1222 aa10□□□□□ -0.81
CMC1-209ENST00000477739 LRRC23Q53EV4 343 aaPredicted RBP10□□□□□ -0.81
CMC1-209ENST00000477739 NOMO2Q5JPE7 1267 aa10□□□□□ -0.81
CMC1-209ENST00000477739 KRT80Q6KB66 452 aa10□□□□□ -0.81
CMC1-209ENST00000477739 LRRC8EQ6NSJ5 796 aa10□□□□□ -0.81
CMC1-209ENST00000477739 ARMCX2Q7L311 632 aa10□□□□□ -0.81
CMC1-209ENST00000477739 PLPPR4Q7Z2D5 763 aa10□□□□□ -0.81
CMC1-209ENST00000477739 MAB21L3Q8N8X9 362 aa10□□□□□ -0.81
CMC1-209ENST00000477739 TFB1MQ8WVM0 346 aaKnown RBP10□□□□□ -0.81
CMC1-209ENST00000477739 BHMTQ93088 406 aa10□□□□□ -0.81
CMC1-209ENST00000477739 RCN3Q96D15 328 aa10□□□□□ -0.81
CMC1-209ENST00000477739 ZNF778Q96MU6 729 aa10□□□□□ -0.81
CMC1-209ENST00000477739 LENG8Q96PV6 779 aaPredicted RBP10□□□□□ -0.81
CMC1-209ENST00000477739 NXF3Q9H4D5 531 aaKnown RBP10□□□□□ -0.81
CMC1-209ENST00000477739 NRDE2Q9H7Z3 1164 aa10□□□□□ -0.81
CMC1-209ENST00000477739 TNFSF13BQ9Y275 285 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms