RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MSH2P43246 934 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 GJA8P48165 433 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SERPINB9P50453 376 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MLLT6P55198 1093 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 PITX1P78337 314 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 AP1B1Q10567 949 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 ILF2Q12905 390 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 DNAJC3Q13217 504 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FRG1Q14331 258 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 MTFR1Q15390 333 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 LONRF1Q17RB8 773 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 ANO4Q32M45 955 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 BBS9Q3SYG4 887 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FNBP1LQ5T0N5 605 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SNX30Q5VWJ9 437 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 ANKRD22Q5VYY1 191 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 LRRC8BQ6P9F7 803 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 KLHDC10Q6PID8 442 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 LRRC31Q6UY01 552 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CTU1Q7Z7A3 348 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 SCD5Q86SK9 330 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 PRUNE1Q86TP1 453 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 EXOC3L1Q86VI1 746 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CEP57Q86XR8 500 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CCDC13Q8IYE1 715 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CMTR2Q8IYT2 770 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 PYROXD2Q8N2H3 581 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 COLGALT1Q8NBJ5 622 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CCNYQ8ND76 341 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FBXO36Q8NEA4 188 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FBXO22Q8NEZ5 403 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SCAMP5Q8TAC9 235 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CCDC110Q8TBZ0 833 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 BCAS4Q8TDM0 211 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MAML1Q92585 1016 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 EDEM1Q92611 657 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FBXO32Q969P5 355 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MTBPQ96DY7 904 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SLC39A13Q96H72 371 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 ZNF333Q96JL9 665 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 BTN2A3PQ96KV6 586 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SMC6Q96SB8 1091 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 DHRS4Q9BTZ2 278 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 NSRP1Q9H0G5 558 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.16□□□□□ -1.1
VMA21-203ENST00000477649 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 COX16Q9P0S2 106 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 AFF4Q9UHB7 1163 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 RABGEF1Q9UJ41 708 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 HBS1LQ9Y450 684 aaKnown RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 A0A1W2PQH9 124 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 SDR42E2A6NKP2 422 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 SMIM23A6NLE4 172 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 RASA4BC9J798 803 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 EBAG9O00559 213 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 NDUFAB1O14561 156 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 KIAA0355O15063 1070 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 RASA4O43374 803 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 CACNG3O60359 315 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 KRT37O76014 449 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 ANXA9O76027 345 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 CPP00450 1065 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 INHBAP08476 426 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 ZDHHC11BP0C7U3 371 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 SRGAP2BP0DMP2 458 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 BRAFP15056 766 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 RHOQP17081 205 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 PRKCHP24723 683 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 ELK3P41970 407 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 SLCO1A2P46721 670 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 IFNAR2P48551 515 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TUBP50607 506 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 NDST2P52849 883 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TBX4P57082 545 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 GPX6P59796 221 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 IFI35P80217 286 aaPredicted RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 MGAT5BQ3V5L5 792 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TRIM60Q495X7 471 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TEX44Q53QW1 395 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TMCO4Q5TGY1 634 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 KIAA1841Q6NSI8 718 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 PID1Q7Z2X4 250 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 LINC00523Q86TU6 105 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TRABD2AQ86V40 505 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 SLC26A11Q86WA9 606 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 LRRC6Q86X45 466 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 CCDC117Q8IWD4 279 aaPredicted RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 KLHDC8BQ8IXV7 354 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 TMEM199Q8N511 208 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 RTL3Q8N8U3 475 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 STKLD1Q8NE28 680 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.1
VMA21-203ENST00000477649 GSDMBQ8TAX9 411 aa8.15□□□□□ -1.1
VMA21-203ENST00000477649 CDKL2Q92772 493 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms