RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SMPD4Q9NXE4 827 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 MPP6Q9NZW5 540 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 FAM153AQ9UHL3 310 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 GOLGA6L7A0A1B0GV03 622 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 CFAP69A5D8W1 941 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 PLTPP55058 493 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 RBM10P98175 930 aaKnown RBP29.69■■■□□ 2.34
VEGFA-211ENST00000476772 LRRC31Q6UY01 552 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 CHSY1Q86X52 802 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 TDHQ8IZJ6 230 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 TFB1MQ8WVM0 346 aaKnown RBP29.69■■■□□ 2.34
VEGFA-211ENST00000476772 ZNF446Q9NWS9 450 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 WHRNQ9P202 907 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 LAMA3Q16787 3333 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 HACD1B0YJ81 288 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 ACSL4O60488 711 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 HNRNPA1P09651 372 aaKnown RBP eCLIP29.69■■■□□ 2.34
VEGFA-211ENST00000476772 HDCP19113 662 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 CORO1AP31146 461 aaKnown RBP29.69■■■□□ 2.34
VEGFA-211ENST00000476772 CCR2P41597 374 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 IRAK1P51617 712 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 GPS1Q13098 491 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 PDK1Q15118 436 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 ZNF697Q5TEC3 545 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 FBXL22Q6P050 247 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 MAB21L3Q8N8X9 362 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.69■■■□□ 2.345e-12■■■■■ 56.2
VEGFA-211ENST00000476772 WBP2Q969T9 261 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 LGMNQ99538 433 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 KLC2Q9H0B6 622 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 TLE6Q9H808 572 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 DNMT3BQ9UBC3 853 aaKnown RBP29.69■■■□□ 2.34
VEGFA-211ENST00000476772 RAD54BQ9Y620 910 aa29.69■■■□□ 2.34
VEGFA-211ENST00000476772 KLKB1P03952 638 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 PTPN2P17706 415 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 TACR2P21452 398 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 EPHA5P54756 1037 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 CALCOCO2Q13137 446 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 P3H1Q32P28 736 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 FAM182AQ5T1J6 154 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 ACBD5Q5T8D3 534 aaPredicted RBP29.68■■■□□ 2.34
VEGFA-211ENST00000476772 EMBQ6PCB8 327 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 DENND1CQ8IV53 801 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 FBXO25Q8TCJ0 367 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 ART4Q93070 314 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 PRDM12Q9H4Q4 367 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 PPARGC1AQ9UBK2 798 aaKnown RBP29.68■■■□□ 2.34
VEGFA-211ENST00000476772 DOCK6Q96HP0 2047 aa29.68■■■□□ 2.34
VEGFA-211ENST00000476772 CLUHO75153 1309 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 IGLV3-10A0A075B6K4 115 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 PPP1R12AO14974 1030 aaPredicted RBP29.67■■■□□ 2.34
VEGFA-211ENST00000476772 VAV1P15498 845 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 RPL22P35268 128 aaKnown RBP29.67■■■□□ 2.34
VEGFA-211ENST00000476772 SLC11A2P49281 568 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 STXBP5Q5T5C0 1151 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 RTL3Q8N8U3 475 aaKnown RBP29.67■■■□□ 2.34
VEGFA-211ENST00000476772 IGSF8Q969P0 613 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 RTP4Q96DX8 246 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 CELF6Q96J87 481 aaKnown RBP29.67■■■□□ 2.34
VEGFA-211ENST00000476772 ZYG11BQ9C0D3 744 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 NDFIP2Q9NV92 336 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 DPP7Q9UHL4 492 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 CPQQ9Y646 472 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 DOCK4Q8N1I0 1966 aa29.67■■■□□ 2.34
VEGFA-211ENST00000476772 TP73O15350 636 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 ITIH2P19823 946 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 TNNT3P45378 269 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 NRIP1P48552 1158 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 PRKD1Q15139 912 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 DUSP6Q16828 381 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 FAM133BQ5BKY9 247 aaKnown RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 IZUMO3Q5VZ72 239 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 NLRP14Q86W24 1093 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 SHKBP1Q8TBC3 707 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 MYEOVQ96EZ4 313 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 ZDHHC7Q9NXF8 308 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 SPDYE4A6NLX3 237 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 WASH4PA8MWX3 477 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 RFXAPO00287 272 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 XYLBO75191 536 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 RHOP08100 348 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 SLC6A4P31645 630 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 ITGA8P53708 1063 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 SMAD3P84022 425 aaKnown RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 GALNT2Q10471 571 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 AP1B1Q10567 949 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 HEATR6Q6AI08 1181 aaKnown RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 CCNYQ8ND76 341 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 CAVIN3Q969G5 261 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 AZIN2Q96A70 460 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 TCEAL4Q96EI5 215 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 RPRD1AQ96P16 312 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-211ENST00000476772 FMO2Q99518 471 aa29.66■■■□□ 2.34
VEGFA-211ENST00000476772 DRGXA6NNA5 263 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 DNALI1O14645 258 aaPredicted RBP29.65■■■□□ 2.34
VEGFA-211ENST00000476772 CNTN5O94779 1100 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 CKMP06732 381 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 RHOQP17081 205 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 ZXDBP98169 803 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 ALFQ53S48 1182 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms