RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 RNF139Q8WU17 664 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 EDEM1Q92611 657 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 WBP1Q96G27 269 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 MRGPRX3Q96LB0 322 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 LGMNQ99538 433 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 OMDQ99983 421 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 ERVMER34-1Q9H9K5 563 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 FZD4Q9ULV1 537 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 COL6A6A6NMZ7 2263 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 MYLKQ15746 1914 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 TRIM49P0CI25 452 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 TRIM49CP0CI26 452 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 ACP1P24666 158 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 SLC8A1P32418 973 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 RAD23BP54727 409 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 RHDQ02161 417 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 SLC45A4Q5BKX6 768 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 PIK3R6Q5UE93 754 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 BSPRYQ5W0U4 402 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 KDM7AQ6ZMT4 941 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 OXR1Q8N573 874 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 INTS6Q9UL03 887 aaKnown RBP17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 TP53BP1Q12888 1972 aaPredicted RBP17.09■□□□□ 0.33
APOBEC3F-203ENST00000476513 ARID1BQ8NFD5 2236 aaPredicted RBP17.08■□□□□ 0.33
APOBEC3F-203ENST00000476513 MT-CO3P00414 261 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 ASLP04424 464 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 SLC6A4P31645 630 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 CSKP41240 450 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 SLC8A3P57103 927 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 ARID5BQ14865 1188 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 PROX2Q3B8N5 592 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM133BQ5BKY9 247 aaKnown RBP17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 AADATQ8N5Z0 425 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 ZNF557Q8N988 423 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 FIBINQ8TAL6 211 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 HIC2Q96JB3 615 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM129BQ96TA1 746 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 SEMA4CQ9C0C4 833 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 MMRN2Q9H8L6 949 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 CPNE5Q9HCH3 593 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 CISHQ9NSE2 258 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 EXOC1Q9NV70 894 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 STIM2Q9P246 746 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 TPX2Q9ULW0 747 aaKnown RBP17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.32
APOBEC3F-203ENST00000476513 YJEFN3A6XGL0 299 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 TTC34A8MYJ7 566 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 E7ENQ6 273 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 TRIM38O00635 465 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 XPO1O14980 1071 aaKnown RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 MAPK13O15264 365 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 LATO43561 262 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 YEATS4O95619 227 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 GOT1P17174 413 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PSMD8P48556 350 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 ADPRHP54922 357 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PCBP4P57723 403 aaKnown RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 TMPRSS3P57727 454 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PPP2CBP62714 309 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PPP2CAP67775 309 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 E2F1Q01094 437 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 ADIGQ0VDE8 80 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 ARHGAP40Q5TG30 622 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 NAPEPLDQ6IQ20 393 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 SND1Q7KZF4 910 aaKnown RBP eCLIP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 MFSD2AQ8NA29 543 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 KDM1BQ8NB78 822 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 OR14C36Q8NHC7 312 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 TATDN2Q93075 761 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 ZNF578Q96N58 590 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 IRX2Q9BZI1 471 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 CLMPQ9H6B4 373 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 LRRC4Q9HBW1 653 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 PCDHB1Q9Y5F3 818 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 SPTA1P02549 2419 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 MGAQ8IWI9 3026 aa17.07■□□□□ 0.32
APOBEC3F-203ENST00000476513 TARSL2A2RTX5 802 aaKnown RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 PYCARD-AS1I3L0S3 204 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 IRAK2O43187 625 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 SIGLEC6O43699 453 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 SDC3O75056 442 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 IGLV3-27P01718 113 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 CTSOP43234 321 aaPredicted RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 SLC11A2P49281 568 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 GOLGA7BQ2TAP0 167 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 BROXQ5VW32 411 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 INTS8Q75QN2 995 aaKnown RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM181AQ8N9Y4 354 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 MYEOVQ96EZ4 313 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms