RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 F7P08709 466 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 CCND3P30281 292 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 TPI1P60174 286 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 CCDC15Q0P6D6 951 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 IFRD2Q12894 506 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SEMA3BQ13214 749 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 MFSD14CQ5VZR4 134 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 XPNPEP3Q9NQH7 507 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 OR12D3Q9UGF7 316 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 PSAT1Q9Y617 370 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ADAMTS4O75173 837 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 PRKCZQ05513 592 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 PARP6Q2NL67 630 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 NDUFAF2Q8N183 169 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 OR10T2Q8NGX3 314 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 GORASP1Q9BQQ3 440 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 SYBUQ9NX95 663 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 HEY2Q9UBP5 337 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 PPP1R12AO14974 1030 aaPredicted RBP17.09■□□□□ 0.33
TVP23B-202ENST00000476139 DCTN3O75935 186 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 KRT38O76015 456 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 RPL9P32969 192 aaKnown RBP17.09■□□□□ 0.33
TVP23B-202ENST00000476139 CLNS1AP54105 237 aaKnown RBP17.09■□□□□ 0.33
TVP23B-202ENST00000476139 INHBEP58166 350 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
TVP23B-202ENST00000476139 KCNK13Q9HB14 408 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
TVP23B-202ENST00000476139 SEPT4O43236 478 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 STK10O94804 968 aaKnown RBP17.08■□□□□ 0.33
TVP23B-202ENST00000476139 GM2AP17900 193 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 PTPN3P26045 913 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 PCSK1P29120 753 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 PGFP49763 221 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 IRX4P78413 519 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 YY1AP1Q9H869 796 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 EBF2Q9HAK2 575 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 CSNK1G1Q9HCP0 422 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 NOP53Q9NZM5 478 aaKnown RBP17.08■□□□□ 0.33
TVP23B-202ENST00000476139 KLHL8Q9P2G9 620 aaPredicted RBP17.08■□□□□ 0.33
TVP23B-202ENST00000476139 TSC2P49815 1807 aa17.08■□□□□ 0.33
TVP23B-202ENST00000476139 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 CCND1P24385 295 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 LPIN1Q14693 890 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 NAA25Q14CX7 972 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 FAM13CQ8NE31 585 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 TTC8Q8TAM2 541 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 NTAN1Q96AB6 310 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.32
TVP23B-202ENST00000476139 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 NUP205Q92621 2012 aa17.08■□□□□ 0.32
TVP23B-202ENST00000476139 CCDC195A0A1B0GUA6 201 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 C9IYK1 514 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ZBTB24O43167 697 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ENTPD5O75356 428 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 LRIG2O94898 1065 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 GSTA2P09210 222 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ERVK-10P10266 1014 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ELNP15502 786 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 GMPRP36959 345 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 CDK16Q00536 496 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 FAM171BQ6P995 826 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 C2CD2LO14523 706 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ODC1P11926 461 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 MLNP12872 115 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 SCAPQ12770 1279 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 CRYMQ14894 314 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 TTC7BQ86TV6 843 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 STKLD1Q8NE28 680 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 LRMDAQ9H2I8 198 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 UBP1Q9NZI7 540 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ZNF623O75123 536 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 SERPINB3P29508 390 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ZBTB16Q05516 673 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ZBTB17Q13105 803 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 CLNKQ7Z7G1 428 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 TAC4Q86UU9 113 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 RNF34Q969K3 372 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 PGAP3Q96FM1 320 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 FCRL3Q96P31 734 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 RAB3IPQ96QF0 476 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 APOL2Q9BQE5 337 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 TRIM55Q9BYV6 548 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 C20orf27Q9GZN8 174 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms