RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 TAF5Q15542 800 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 FUT11Q495W5 492 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ZC3H12AQ5D1E8 599 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 MS4A13Q5J8X5 152 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 LYSMD4Q5XG99 296 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 TMEM215Q68D42 235 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 KIAA1324Q6UXG2 1013 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC26A9Q7LBE3 791 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 CHSY1Q86X52 802 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ZNF677Q86XU0 584 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 RNF34Q969K3 372 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ERLEC1Q96DZ1 483 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 MRGPRX1Q96LB2 322 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 PRICKLE1Q96MT3 831 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 NUCKS1Q9H1E3 243 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 GANQ9H2C0 597 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 DDIT4Q9NX09 232 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 STIM2Q9P246 746 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 MBD1Q9UIS9 605 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 STAP1Q9ULZ2 295 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 CYP8B1Q9UNU6 501 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 DOCK9Q9BZ29 2069 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 SYNJ2BP-COX16A0A087WUM0 186 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 KALRNO60229 2985 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 LUC7L3O95232 432 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 TACR2P21452 398 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 CD70P32970 193 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 NOS2P35228 1153 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 POLR2FP61218 127 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 TYRO3Q06418 890 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 FNDC3BQ53EP0 1204 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 TTC39BQ5VTQ0 682 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 TAF3Q5VWG9 929 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 RAP1GAP2Q684P5 730 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 MBLAC2Q68D91 279 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 ARMCX6Q7L4S7 300 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 ADIPOR2Q86V24 386 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 CARNMT1Q8N4J0 409 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 FIBINQ8TAL6 211 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 WFDC5Q8TCV5 224 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 SORCS1Q8WY21 1168 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 RRN3Q9NYV6 651 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 COX16Q9P0S2 106 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
NUDCD3-206ENST00000475952 LGALS16A8MUM7 142 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 KCNU1A8MYU2 1149 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 H0Y626 953 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 NDUFS2O75306 463 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 GFPT2O94808 682 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 MOCS3O95396 460 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 ASLP04424 464 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 DLDP09622 509 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 ACADMP11310 421 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 PRKCHP24723 683 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 SOX5P35711 763 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 SCNN1AP37088 669 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 MATKP42679 507 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 GABRB2P47870 512 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 KLK7P49862 253 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 ST8SIA6P61647 398 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 RPS24P62847 133 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 PITX1P78337 314 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 LMAN2Q12907 356 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 NME3Q13232 169 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 EIF4EBP2Q13542 120 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 SYCP1Q15431 976 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 SND1Q7KZF4 910 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 TMPRSS6Q8IU80 811 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 SYT12Q8IV01 421 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 LGI2Q8N0V4 545 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 ZCCHC14Q8WYQ9 949 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 PIGKQ92643 395 aa11.78□□□□□ -0.52
NUDCD3-206ENST00000475952 PRCCQ92733 491 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms