RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ITIH2P19823 946 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 DDX6P26196 483 aaKnown RBP eCLIP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 GABRR2P28476 465 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 IRS1P35568 1242 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 SEMA3BQ13214 749 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 DPYSQ14117 519 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 PAFAH1B3Q15102 231 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 OASLQ15646 514 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 CTC1Q2NKJ3 1217 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 FBXO38Q6PIJ6 1188 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 PCGF5Q86SE9 256 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TFB1MQ8WVM0 346 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 CASKIN2Q8WXE0 1202 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 SNF8Q96H20 258 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 FAM118BQ9BPY3 351 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TSPYL1Q9H0U9 437 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 ATXN3LQ9H3M9 355 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 RETREG1Q9H6L5 497 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TLE6Q9H808 572 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 PCDH9Q9HC56 1237 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
MRPL55-227ENST00000475832 LSM7Q9UK45 103 aaKnown RBP12.61□□□□□ -0.39
MRPL55-227ENST00000475832 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 ESYT3A0FGR9 886 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 SOBPA7XYQ1 873 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 E9PAM4 449 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 F5H5T6 163 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 CCL16O15467 120 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 MTSS1O43312 755 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 COCHO43405 550 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 LRIG2O94898 1065 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 IGLV3-27P01718 113 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 MYL4P12829 197 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 HDCP19113 662 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 HYAL1Q12794 435 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 RABGAP1LQ5R372 815 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 NPNTQ6UXI9 565 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 CHSY1Q86X52 802 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 SEC14L1Q92503 715 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 AZIN2Q96A70 460 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 CORO1BQ9BR76 489 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 TMEM121Q9BTD3 319 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 ZYG11BQ9C0D3 744 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 WHRNQ9P202 907 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-227ENST00000475832 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 SNX24Q9Y343 169 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
MRPL55-227ENST00000475832 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 TYW5A2RUC4 315 aaKnown RBP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 FAM72CH0Y354 149 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 SMAPO00193 183 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ZNF197O14709 1029 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 DCLK1O15075 740 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 KCNN4O15554 427 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ACSL4O60488 711 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 LATS1O95835 1130 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 POU2F2P09086 479 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 RHOQP17081 205 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 CLCN6P51797 869 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 GBE1Q04446 702 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 FAM72AQ5TYM5 149 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 FAM72DQ6L9T8 149 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 FAM72BQ86X60 149 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 LRRC49Q8IUZ0 686 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 CCNYQ8ND76 341 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 QKIQ96PU8 341 aaKnown RBP eCLIP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 PIDD1Q9HB75 910 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 DTLQ9NZJ0 730 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 PAK5Q9P286 719 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 PPARGC1AQ9UBK2 798 aaKnown RBP12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ANAPC5Q9UJX4 755 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ZNF510Q9Y2H8 683 aa12.59□□□□□ -0.39
MRPL55-227ENST00000475832 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-227ENST00000475832 ATP8B1O43520 1251 aa12.58□□□□□ -0.4
MRPL55-227ENST00000475832 MFSD11O43934 449 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms