RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 RPRD1AQ96P16 312 aaPredicted RBP9.46□□□□□ -0.9
SYN3-211ENST00000472027 SYT11Q9BT88 431 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 SELENOOQ9BVL4 669 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 SIK2Q9H0K1 926 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 DUSP15Q9H1R2 295 aaPredicted RBP9.46□□□□□ -0.9
SYN3-211ENST00000472027 HAUS4Q9H6D7 363 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 IFNKQ9P0W0 207 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 KIAA1522Q9P206 1035 aaPredicted RBP9.46□□□□□ -0.9
SYN3-211ENST00000472027 INTS6Q9UL03 887 aaKnown RBP9.46□□□□□ -0.9
SYN3-211ENST00000472027 VANGL2Q9ULK5 521 aa9.46□□□□□ -0.9
SYN3-211ENST00000472027 C2CD4BA6NLJ0 364 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SIGLEC16A6NMB1 481 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SYNCRIPO60506 623 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 CALB1P05937 261 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 EPHX1P07099 455 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 DLDP09622 509 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 SKILP12757 684 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 NDUFV2P19404 249 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 BCKDHBP21953 392 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TGM1P22735 817 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 PRKCHP24723 683 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SDC4P31431 198 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 RDXP35241 583 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 RFC1P35251 1148 aaPredicted RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 GGCXP38435 758 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 P2RY2P41231 377 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 PRKCIP41743 596 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 ATP11AP98196 1134 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 C1QBPQ07021 282 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 SPEM2Q0P670 501 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 BYSLQ13895 437 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 STARD3Q14849 445 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 PTPRNQ16849 979 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 CDO1Q16878 200 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 FUT11Q495W5 492 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 C5orf22Q49AR2 442 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 FNDC3BQ53EP0 1204 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 RAB6CQ53S08 254 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 RABGAP1LQ5R372 815 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SH3PXD2AQ5TCZ1 1133 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TTC39BQ5VTQ0 682 aaPredicted RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 WDR59Q6PJI9 974 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SERPINA13PQ6UXR4 307 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 MON1BQ7L1V2 547 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 ZNF571Q7Z3V5 609 aaPredicted RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 C11orf74Q86VG3 221 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 MCOLN2Q8IZK6 566 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 APCDD1Q8J025 514 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 CCAR2Q8N163 923 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
SYN3-211ENST00000472027 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TTC17Q96AE7 1141 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 LOXL4Q96JB6 756 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 MRGPRX1Q96LB2 322 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 C1orf74Q96LT6 269 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 RAB6CQ9H0N0 254 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SLC6A17Q9H1V8 727 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 ARRDC1-AS1Q9H2J1 176 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TMEM245Q9H330 911 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TSPY26PQ9H489 355 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TMPRSS4Q9NRS4 437 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 TAS2R14Q9NYV8 317 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 PAXBP1Q9Y5B6 917 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 SNX10Q9Y5X0 201 aa9.45□□□□□ -0.9
SYN3-211ENST00000472027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 A0A1W2PQJ5 194 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 TCRBV5S1A1TA0A578 114 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 TCAF2A6NFQ2 919 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 DRGXA6NNA5 263 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 MAP3K13O43283 966 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ZNF217O75362 1048 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 MOCS3O95396 460 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ASLP04424 464 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 HLA-EP13747 358 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 RRM1P23921 792 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 CSKP41240 450 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 PTPN9P43378 593 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 IRAK1P51617 712 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 PLK1P53350 603 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 COPAP53621 1224 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 KLHL30Q0D2K2 578 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ZNF177Q13360 481 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ELF2Q15723 593 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 PITRM1Q5JRX3 1037 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
SYN3-211ENST00000472027 PPP1R2P3Q6NXS1 205 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 DNAJC24Q6P3W2 148 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
SYN3-211ENST00000472027 ZNF683Q8IZ20 524 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms