RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-208ENST00000471913 SNX27Q96L92 541 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
AMPH-208ENST00000471913 CCDC106Q9BWC9 280 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 ARHGEF4Q9NR80 690 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.26□□□□□ -0.45
AMPH-208ENST00000471913 DTLQ9NZJ0 730 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 TRPV2Q9Y5S1 764 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 RAD54BQ9Y620 910 aa12.26□□□□□ -0.45
AMPH-208ENST00000471913 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 HMX2A2RU54 273 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 PIK3R2O00459 728 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 MAP3K7O43318 606 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 FKBP6O75344 327 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 CD4P01730 458 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 CHRNA1P02708 482 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 GARSP41250 739 aaKnown RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 GLUD2P49448 558 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 CDK7P50613 346 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 BMPR2Q13873 1038 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 GSTA3Q16772 222 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 MROH9Q5TGP6 573 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 NCBP2-AS2Q69YL0 99 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 TRIM68Q6AZZ1 485 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 NOTUMQ6P988 496 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 SCUBE1Q8IWY4 988 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 ADAM28Q9UKQ2 775 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 UBQLN1Q9UMX0 589 aaKnown RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 CDY2AQ9Y6F7 541 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 USP3Q9Y6I4 520 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 H3BRJ5 948 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 M0QZ92 97 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 NPTXRO95502 500 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SERPINE1P05121 402 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 FAM163BP0C2L3 166 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 CCDC130P13994 396 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 MATKP42679 507 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 AIF1P55008 147 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 ACTR3P61158 418 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 AP2B1P63010 937 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SLC10A2Q12908 348 aaPredicted RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 PDK1Q15118 436 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SLC25A52Q3SY17 297 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 MBLAC2Q68D91 279 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 AAGABQ6PD74 315 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 TRMT10BQ6PF06 316 aaKnown RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 ADGRG6Q86SQ4 1221 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 TTC7BQ86TV6 843 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 ADGRF2Q8IZF7 708 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 PPP4R1Q8TF05 950 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 FAM136AQ96C01 138 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 RILPQ96NA2 401 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
AMPH-208ENST00000471913 MECRQ9BV79 373 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SEZ6LQ9BYH1 1024 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 FAM49BQ9NUQ9 324 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 GDAP2Q9NXN4 497 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 SOX13Q9UN79 622 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
AMPH-208ENST00000471913 CITO14578 2027 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 TBX10O75333 385 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 DAB1O75553 588 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 KRT36O76013 467 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 ENO1P06733 434 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 ALOX15P16050 662 aaPredicted RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 PAX7P23759 505 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 IRX1P78414 480 aaPredicted RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 CCDC153Q494R4 210 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 HSF5Q4G112 596 aaPredicted RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 SPANXN3Q5MJ09 141 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 PACS1Q6VY07 963 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 PDZD4Q76G19 769 aaPredicted RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 KIRREL3Q8IZU9 778 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 RBM15BQ8NDT2 890 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 SCG3Q8WXD2 468 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 ISL2Q96A47 359 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 PRR11Q96HE9 360 aaPredicted RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 TNIP3Q96KP6 325 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 FAM161BQ96MY7 647 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 CCDC28BQ9BUN5 200 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 TRMT13Q9NUP7 481 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 DNAJC28Q9NX36 388 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 ARMCX1Q9P291 453 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 IGSF9Q9P2J2 1179 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 TXNDC16Q9P2K2 825 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 OGDHLQ9ULD0 1010 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 FZD10Q9ULW2 581 aa12.24□□□□□ -0.45
AMPH-208ENST00000471913 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
AMPH-208ENST00000471913 XPO1O14980 1071 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms