RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 WDCPQ9H6R7 721 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 PRDM16Q9HAZ2 1276 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 PIGVQ9NUD9 493 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-218ENST00000470942 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 FOXD2O60548 495 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 MOCS3O95396 460 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 CAVIN2O95810 425 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 F9P00740 461 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 DLDP09622 509 aaKnown RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 TFE3P19532 575 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 FLT3P36888 993 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 CSKP41240 450 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 TPM4P67936 248 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 RPL6Q02878 288 aaKnown RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 MTA1Q13330 715 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 IQCB1Q15051 598 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 SLC25A52Q3SY17 297 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 AASDHQ4L235 1098 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 FSCBQ5H9T9 825 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 OTUD1Q5VV17 481 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 FBXL22Q6P050 247 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 SLC36A4Q6YBV0 504 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 DEFB119Q8N690 84 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 LMLNQ96KR4 655 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 RPRD1AQ96P16 312 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 PCDHB18PQ96TA0 734 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
HDAC6-218ENST00000470942 VPS45Q9NRW7 570 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 VANGL2Q9ULK5 521 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 HS3ST4Q9Y661 456 aa16.22■□□□□ 0.19
HDAC6-218ENST00000470942 IGHV1OR15-9A0A0B4J2B8 117 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 AP5Z1O43299 807 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PAGE1O75459 146 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 ADCY5O95622 1261 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 SERPINC1P01008 464 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CCDC172P0C7W6 258 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 FERP16591 822 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 SDHBP21912 280 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 MMP8P22894 467 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 GGCXP38435 758 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 NSFP46459 744 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CXCR3P49682 368 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 ST8SIA6P61647 398 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 AUHQ13825 339 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PTPRNQ16849 979 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PITRM1Q5JRX3 1037 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 BRMS1LQ5PSV4 323 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PLA2G2CQ5R387 149 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TTC39BQ5VTQ0 682 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CIR1Q86X95 450 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CACUL1Q86Y37 369 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CCAR2Q8N163 923 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PIGKQ92643 395 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PRCCQ92733 491 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 NT5C3BQ969T7 300 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 ADAM33Q9BZ11 813 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 MKRN2Q9H000 416 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TKTL2Q9H0I9 626 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TMEM245Q9H330 911 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CBX8Q9HC52 389 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CD93Q9NPY3 652 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 SUN2Q9UH99 717 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TMEM59LQ9UK28 342 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 CDV3Q9UKY7 258 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 INTS6Q9UL03 887 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 PAXBP1Q9Y5B6 917 aa16.21■□□□□ 0.19
HDAC6-218ENST00000470942 TNRC6BQ9UPQ9 1833 aaKnown RBP16.21■□□□□ 0.19
HDAC6-218ENST00000470942 GON4LQ3T8J9 2241 aa16.21■□□□□ 0.18
HDAC6-218ENST00000470942 MUC22E2RYF6 1773 aaPredicted RBP16.21■□□□□ 0.18
HDAC6-218ENST00000470942 GDF9O60383 454 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 NDUFS2O75306 463 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 ASLP04424 464 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 ACADMP11310 421 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 UNGP13051 313 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-218ENST00000470942 PTGER3P43115 390 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 PUM1Q14671 1186 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDAC6-218ENST00000470942 CLEC16AQ2KHT3 1053 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 C14orf80Q86SX3 495 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 EMC1Q8N766 993 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 PGAP3Q96FM1 320 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-218ENST00000470942 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 NAP1L5Q96NT1 182 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-218ENST00000470942 ARHGEF38Q9NXL2 777 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 ADAM22Q9P0K1 906 aa16.2■□□□□ 0.18
HDAC6-218ENST00000470942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 A0A1B0GTH6 734 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 A0A1B0GVM2 712 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 TCAF2A6NFQ2 919 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 PDGFRAP16234 1089 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 NUMBP49757 651 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms