RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TMEM25Q86YD3 366 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 SLC13A5Q86YT5 568 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 CFAP52Q8N1V2 620 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 TTC16Q8NEE8 873 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 RBM41Q96IZ5 413 aaKnown RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 EPAS1Q99814 870 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 HEMGNQ9BXL5 484 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 CALN1Q9BXU9 219 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 NDFIP2Q9NV92 336 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 SMARCAL1Q9NZC9 954 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 TBC1D14Q9P2M4 693 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 NR2E1Q9Y466 385 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 XIRP2A4UGR9 3374 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 PRUNE2Q8WUY3 3088 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 OTOL1A6NHN0 477 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 F5H5T6 163 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ARNTLO00327 626 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 CEP104O60308 925 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TSPAN3O60637 253 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ARSAP15289 507 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 RHOQP17081 205 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ERCC2P18074 760 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 EPHB2P29323 1055 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 HTR7P34969 479 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 CHKAP35790 457 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ARL4AP40617 200 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TPI1P60174 286 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 SLC10A2Q12908 348 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 GAB4Q2WGN9 574 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 FYB2Q5VWT5 728 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TRIM68Q6AZZ1 485 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 CIR1Q86X95 450 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 PLD5Q8N7P1 536 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TDRD5Q8NAT2 981 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 KIF18AQ8NI77 898 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 RSAD2Q8WXG1 361 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 IRF7Q92985 503 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 OTUB2Q96DC9 234 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TBC1D31Q96DN5 1066 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 TMA16Q96EY4 203 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 ZFYVE19Q96K21 471 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 RPGRIP1Q96KN7 1286 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 DDX50Q9BQ39 737 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 NOL6Q9H6R4 1146 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 HPS4Q9NQG7 708 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 DUS2Q9NX74 493 aaKnown RBP11.6□□□□□ -0.55
SREBF1-209ENST00000470247 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 CLEC4EQ9ULY5 219 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 NUMBLQ9Y6R0 609 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 C5orf42Q9H799 3197 aa11.6□□□□□ -0.55
SREBF1-209ENST00000470247 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 LOC730098B7Z3J9 87 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 SLC9A3R1O14745 358 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 CST8O60676 142 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 PENKP01210 267 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 PSMC3P17980 439 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 GRM2Q14416 872 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 PAFAH1B3Q15102 231 aaKnown RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 DHCR24Q15392 516 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 LY6G5CQ5SRR4 150 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 AFMIDQ63HM1 303 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 KAZNQ674X7 775 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 RWDD4Q6NW29 188 aaKnown RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 LRRC31Q6UY01 552 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 MTSS1LQ765P7 747 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 CCDC50Q8IVM0 306 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 NPWQ8N729 165 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 RTL3Q8N8U3 475 aaKnown RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 OR52K2Q8NGK3 314 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 WFDC5Q8TCV5 224 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 ACTRT1Q8TDG2 376 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 DEPDC1BQ8WUY9 529 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 LMLNQ96KR4 655 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 SPHK2Q9NRA0 654 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 TMEM248Q9NWD8 314 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 CDC23Q9UJX2 597 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
SREBF1-209ENST00000470247 KIF26AQ9ULI4 1882 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-209ENST00000470247 MYO10Q9HD67 2058 aa11.58□□□□□ -0.56
SREBF1-209ENST00000470247 CHADO15335 359 aa11.58□□□□□ -0.56
SREBF1-209ENST00000470247 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-209ENST00000470247 TBL1XO60907 577 aa11.58□□□□□ -0.56
SREBF1-209ENST00000470247 URI1O94763 535 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-209ENST00000470247 FGGP02679 453 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms