RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CD4P01730 458 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 FESP07332 822 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PDGFRBP09619 1106 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 TKTP29401 623 aaKnown RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 ADCYAP1R1P41586 468 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 SULT1E1P49888 294 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 CDK7P50613 346 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ABCE1P61221 599 aaKnown RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 CDC42EP1Q00587 391 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 KIZQ2M2Z5 673 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 CCDC153Q494R4 210 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 SLC2A14Q8TDB8 520 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 SLC2A13Q96QE2 648 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 HNRNPABQ99729 332 aaKnown RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 GORASP1Q9BQQ3 440 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 SCOCQ9UIL1 159 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PLXNB2O15031 1838 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF638Q14966 1978 aaKnown RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 SBF1O95248 1867 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 RECQL4O94761 1208 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 POLBP06746 335 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PRDX6P30041 224 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 NOS2P35228 1153 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PNPLA4P41247 253 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 HNRNPDQ14103 355 aaKnown RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 HIC1Q14526 733 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 GLRA4Q5JXX5 417 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 NOTUMQ6P988 496 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 RFX8Q6ZV50 586 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 MOB2Q70IA6 237 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 TMEM135Q86UB9 458 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PIGZQ86VD9 579 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 RASSF3Q86WH2 238 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ACTRT2Q8TDY3 377 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PPP4R1Q8TF05 950 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 KCTD13Q8WZ19 329 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF560Q96MR9 790 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 FCRL3Q96P31 734 aaPredicted RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 RBBP8Q99708 897 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 FERMT1Q9BQL6 677 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 MCMBPQ9BTE3 642 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 YIPF3Q9GZM5 350 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 S100A14Q9HCY8 104 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PNPOQ9NVS9 261 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ZDHHC7Q9NXF8 308 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 NDE1Q9NXR1 346 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 CDKN2AIPQ9NXV6 580 aaPredicted RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 PPM1HQ9ULR3 514 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 HES2Q9Y543 173 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 PCDHB12Q9Y5F1 795 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 RAD54BQ9Y620 910 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 SCN4AP35499 1836 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF236Q9UL36 1845 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ADCY6O43306 1168 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 UPP2O95045 317 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 MMP3P08254 477 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 RALBP11234 206 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 KCNE1P15382 129 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 MX2P20592 715 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 GARSP41250 739 aaKnown RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 NUMBP49757 651 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 COPAP53621 1224 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 LIMK2P53671 638 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 PITX1P78337 314 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 MXRA7P84157 204 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 PDE1BQ01064 536 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 DEUP1Q05D60 604 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 PPM1JQ5JR12 505 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 CLEC14AQ86T13 490 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SLC7A14Q8TBB6 771 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 GTF3C2Q8WUA4 911 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ECSITQ9BQ95 431 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 NXF3Q9H4D5 531 aaKnown RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SLC24A3Q9HC58 644 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SNX15Q9NRS6 342 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 RRN3P2A6NIE6 340 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 AHCYL1O43865 530 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ERVK-10P10266 1014 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 CPA3P15088 417 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 WARSP23381 471 aaKnown RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 TYK2P29597 1187 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 CSRP3P50461 194 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SLC25A3Q00325 362 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 DSG1Q02413 1049 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SEMA3BQ13214 749 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF618Q5T7W0 954 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 KCTD11Q693B1 232 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 CATSPER4Q7RTX7 472 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 GSTCDQ8NEC7 633 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF483Q8TF39 744 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 PGBD4Q96DM1 585 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms