RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 HOXD9P28356 352 aaPredicted RBP11.62□□□□□ -0.55
MSH5-214ENST00000468602 ARL4AP40617 200 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 CDKN2BP42772 138 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 IFNAR2P48551 515 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 GAD2Q05329 585 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 NR1H3Q13133 447 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 TDGQ13569 410 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RUNX3Q13761 415 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 ATP13A4Q4VNC1 1196 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FAM72AQ5TYM5 149 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 DAB2IPQ5VWQ8 1189 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FAM72DQ6L9T8 149 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RFX8Q6ZV50 586 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 C14orf80Q86SX3 495 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FAM72BQ86X60 149 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 LRRC49Q8IUZ0 686 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 UMODL1-AS1Q8N2C9 162 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 SLC35F6Q8N357 371 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RASGEF1CQ8N431 466 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FIBINQ8TAL6 211 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RAPGEF5Q92565 580 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 KRT35Q92764 455 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 FATE1Q969F0 183 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 IGSF8Q969P0 613 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 P2RY11Q96G91 374 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RPGRIP1Q96KN7 1286 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 CSPG4P5Q96PW8 444 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RNF157Q96PX1 679 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 KXD1Q9BQD3 176 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 ZYG11BQ9C0D3 744 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 KLC2Q9H0B6 622 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 DHX35Q9H5Z1 703 aaKnown RBP11.62□□□□□ -0.55
MSH5-214ENST00000468602 C8orf33Q9H7E9 229 aaPredicted RBP11.62□□□□□ -0.55
MSH5-214ENST00000468602 CATSPERBQ9H7T0 1116 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 TMPRSS4Q9NRS4 437 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH5-214ENST00000468602 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 DUSP12Q9UNI6 340 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 RAD54BQ9Y620 910 aa11.62□□□□□ -0.55
MSH5-214ENST00000468602 hCG_1818297A0A087WSY0 165 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 TMEM110-MUSTN1A8MSY1 372 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 H3BRJ5 948 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 FANCGO15287 622 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 FTCDO95954 541 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 CYBBP04839 570 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 HMBSP08397 361 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 IRF1P10914 325 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 NDST2P52849 883 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 CDH6P55285 790 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 YBEYP58557 167 aaPredicted RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 AMPD2Q01433 879 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 ZNF33AQ06730 810 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 DMC1Q14565 340 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 PAFAH1B3Q15102 231 aaKnown RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 ITPRIPL2Q3MIP1 535 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 KCNT1Q5JUK3 1230 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 ZNF569Q5MCW4 686 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 LY6G5CQ5SRR4 150 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 DCAF12L1Q5VU92 463 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 CHSY1Q86X52 802 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 TMEM25Q86YD3 366 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 YAF2Q8IY57 180 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 UBALD2Q8IYN6 164 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 PYROXD2Q8N2H3 581 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 PHTF2Q8N3S3 785 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
MSH5-214ENST00000468602 KCTD6Q8NC69 237 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 PCDH19Q8TAB3 1148 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 PBKQ96KB5 322 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 WDR24Q96S15 920 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 RNF14Q9UBS8 474 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 SORCS3Q9UPU3 1222 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 WNT6Q9Y6F9 365 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 MYOFQ9NZM1 2061 aa11.61□□□□□ -0.55
MSH5-214ENST00000468602 KIAA1549LQ6ZVL6 1849 aa11.6□□□□□ -0.55
MSH5-214ENST00000468602 GOLGA6L7A0A1B0GV03 622 aa11.6□□□□□ -0.55
MSH5-214ENST00000468602 ILVBLA1L0T0 632 aa11.6□□□□□ -0.55
MSH5-214ENST00000468602 TYW5A2RUC4 315 aaKnown RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 EEF2KO00418 725 aaKnown RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 TRDMT1O14717 391 aaKnown RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 ZNF189O75820 626 aaPredicted RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 MOCS2O96007 188 aaPredicted RBP11.6□□□□□ -0.55
MSH5-214ENST00000468602 CISD3P0C7P0 127 aa11.6□□□□□ -0.55
MSH5-214ENST00000468602 PYGMP11217 842 aa11.6□□□□□ -0.55
MSH5-214ENST00000468602 ADH5P11766 374 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms