RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 EEF2KO00418 725 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 F11P03951 625 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 DESP17661 470 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RBL1P28749 1068 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 IRS1P35568 1242 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PLTPP55058 493 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PRKD1Q15139 912 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PPP1R7Q15435 360 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ODF2Q5BJF6 829 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 AFMIDQ63HM1 303 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 TMC8Q8IU68 726 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 IQCKQ8N0W5 287 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 OVCA2Q8WZ82 227 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 WBP2Q969T9 261 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PSMG2Q969U7 264 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 SNF8Q96H20 258 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF419Q96HQ0 510 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 C1orf74Q96LT6 269 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 QKIQ96PU8 341 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PCDH9Q9HC56 1237 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RASAL2Q9UJF2 1139 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 MAFFQ9ULX9 164 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 MAGED2Q9UNF1 606 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 C2orf78A6NCI8 922 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 COCHO43405 550 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 GREM1O60565 184 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 OAS1P00973 400 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ITIH2P19823 946 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 CCR1P32246 355 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 NR2C2P49116 596 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 CLCN4P51793 760 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 EFEMP1Q12805 493 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 XRCC4Q13426 336 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 TRIP4Q15650 581 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 P3H1Q32P28 736 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MS4A13Q5J8X5 152 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 HDXQ7Z353 690 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 NLRP14Q86W24 1093 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MRPL43Q8N983 215 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ADAMTS19Q8TE59 1207 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SNRNP27Q8WVK2 155 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 P2RY11Q96G91 374 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 LGMNQ99538 433 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 GORASP1Q9BQQ3 440 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ZBED2Q9BTP6 218 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 YBX2Q9Y2T7 364 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 DOCK6Q96HP0 2047 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 IGLV3-10A0A075B6K4 115 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 H3BRJ5 948 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 DNALI1O14645 258 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 CXCL14O95715 111 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 GBP1P32455 592 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MAGEA10P43363 369 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 VPS41P49754 854 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MLLT6P55198 1093 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 FXNQ16595 210 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ANKRD22Q5VYY1 191 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 DNAJB7Q7Z6W7 309 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ARHGAP12Q8IWW6 846 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 CPT1BQ92523 772 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 TCF25Q9BQ70 676 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 WDR83Q9BRX9 315 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 NOL6Q9H6R4 1146 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 VIPAS39Q9H9C1 493 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 STK39Q9UEW8 545 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 NUP205Q92621 2012 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 H3BQF6 201 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SGK1O00141 431 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 GRM6O15303 877 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 TLR5O60602 858 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SYF2O95926 243 aaKnown RBP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 GAS8O95995 478 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 HSD17B3P37058 310 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 ARL4AP40617 200 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 KCNQ1P51787 676 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 LMNB2Q03252 620 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MAP9Q49MG5 647 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SLC45A4Q5BKX6 768 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 POTEHQ6S545 545 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.05
BRCA1-208ENST00000468300 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 POF1BQ8WVV4 589 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 SLC22A12Q96S37 553 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 FMO2Q99518 471 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 CD248Q9HCU0 757 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 MARCH2Q9P0N8 246 aa8.51□□□□□ -1.05
BRCA1-208ENST00000468300 E9PAM4 449 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 KLKB1P03952 638 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 CSH1P0DML2 217 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 CSH2P0DML3 217 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 ZFXP17010 805 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 CTNNB1P35222 781 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms