RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 RBM41Q96IZ5 413 aaKnown RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 ZFYVE19Q96K21 471 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 DDX50Q9BQ39 737 aaKnown RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 KCNK12Q9HB15 430 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 ARHGEF4Q9NR80 690 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 DUS2Q9NX74 493 aaKnown RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 PRKAG3Q9UGI9 489 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 CTAGE9A4FU28 777 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 OTOL1A6NHN0 477 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 WASH4PA8MWX3 477 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 H3BRJ5 948 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 KIF2AO00139 706 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 EEF2KO00418 725 aaKnown RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 KCNK3O14649 394 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 DCLK1O15075 740 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 CHADO15335 359 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 CREB3O43889 395 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 CNTN5O94779 1100 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 ZRANB2O95218 330 aaKnown RBP eCLIP11.49□□□□□ -0.57
VCP-204ENST00000466100 PENKP01210 267 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 CYP17A1P05093 508 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 HOXD9P28356 352 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 CHKAP35790 457 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 IFNAR2P48551 515 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 TPI1P60174 286 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 RPS24P62847 133 aaKnown RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 ZNF211Q13398 564 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 KRT81Q14533 505 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 PDGFRLQ15198 375 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 AAK1Q2M2I8 961 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 ALFQ53S48 1182 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 MPP7Q5T2T1 576 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 TTC39BQ5VTQ0 682 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 RHBDF2Q6PJF5 856 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 CIR1Q86X95 450 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 TMEM25Q86YD3 366 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 PCDH19Q8TAB3 1148 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 IRF7Q92985 503 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 RPRD1AQ96P16 312 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 PSMB7Q99436 277 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 CALN1Q9BXU9 219 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 ZYG11BQ9C0D3 744 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 KLC2Q9H0B6 622 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 ETNK2Q9NVF9 386 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 IGSF9Q9P2J2 1179 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 DNAI1Q9UI46 699 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 MFHAS1Q9Y4C4 1052 aa11.49□□□□□ -0.57
VCP-204ENST00000466100 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
VCP-204ENST00000466100 A0A1B0GVM2 712 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TCAF2A6NFQ2 919 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 CES2O00748 559 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 FGF10O15520 208 aaPredicted RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 HOXC11O43248 304 aaPredicted RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 TSPAN3O60637 253 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TUBB4AP04350 444 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 ASGR2P07307 311 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 BMP1P13497 986 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 PRLRP16471 622 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 RHOQP17081 205 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 ERCC2P18074 760 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 EPHB2P29323 1055 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 GDI1P31150 447 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 CXCR5P32302 372 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 ARL4AP40617 200 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TNK2Q07912 1038 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 DHCR24Q15392 516 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 MPPE1Q53F39 396 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 ANKRD20A8PQ5CZ79 823 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 RABGAP1LQ5R372 815 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 SLC9A4Q6AI14 798 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 CHST9Q7L1S5 443 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 MAP7D3Q8IWC1 876 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 CFAP52Q8N1V2 620 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 RASGEF1CQ8N431 466 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 RTL3Q8N8U3 475 aaKnown RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 WFDC5Q8TCV5 224 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 COG1Q8WTW3 980 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 ATXN2LQ8WWM7 1075 aaKnown RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 ATP2A3Q93084 1043 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 CHFRQ96EP1 664 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 EBF3Q9H4W6 596 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 RETREG1Q9H6L5 497 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms