RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PABPC1P11940 636 aaKnown RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CD70P32970 193 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 WASP42768 502 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 LMAN2Q12907 356 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CDH18Q13634 790 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 FSCBQ5H9T9 825 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 TMEM215Q68D42 235 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 TXNDC5Q8NBS9 432 aaKnown RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 SPC24Q8NBT2 197 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 PRMT8Q9NR22 394 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 STARD13Q9Y3M8 1113 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.36
CHPF2-202ENST00000465601 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
CHPF2-202ENST00000465601 E9PAM4 449 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 SGK1O00141 431 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 CNTN5O94779 1100 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 SP9P0CG40 484 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 DESP17661 470 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 CDC25BP30305 580 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 PTPN5P54829 565 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 DMC1Q14565 340 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 C5orf22Q49AR2 442 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 SYT13Q7L8C5 426 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
CHPF2-202ENST00000465601 SLFN11Q7Z7L1 901 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHPF2-202ENST00000465601 KCNV2Q8TDN2 545 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 WFIKKN2Q8TEU8 576 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 FNIP1Q8TF40 1166 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 ACDQ96AP0 544 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 BTBD6Q96KE9 485 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 LMLNQ96KR4 655 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 PANX2Q96RD6 677 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 ACOX2Q99424 681 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 CIPCQ9C0C6 399 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 OSBPL2Q9H1P3 480 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 MPP6Q9NZW5 540 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 FBXO4Q9UKT5 387 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 MMP17Q9ULZ9 603 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
CHPF2-202ENST00000465601 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.37
CHPF2-202ENST00000465601 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 DRGXA6NNA5 263 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 WASH3PC4AMC7 463 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 K7ESF4 209 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 TIMM44O43615 452 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ADAM23O75077 832 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 RNF8O76064 485 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 HNRNPLP14866 589 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 MIPP30301 263 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 NUMBP49757 651 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ALFQ53S48 1182 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ACBD5Q5T8D3 534 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 MBLAC2Q68D91 279 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ADIPOR2Q86V24 386 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 PYROXD2Q8N2H3 581 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ZNF557Q8N988 423 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 CTNNBL1Q8WYA6 563 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ATOH1Q92858 354 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 NTAN1Q96AB6 310 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 ERLEC1Q96DZ1 483 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 HHIPQ96QV1 700 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 CACNA2D2Q9NY47 1150 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-202ENST00000465601 CTTNBP2NLQ9P2B4 639 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
CHPF2-202ENST00000465601 PCSK1NQ9UHG2 260 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms