RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF135P52742 658 aaPredicted RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 HADHBP55084 474 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 RPS24P62847 133 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 MRPS21P82921 87 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 SLC12A1Q13621 1099 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 EIF4HQ15056 248 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 HSF5Q4G112 596 aaPredicted RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 BOLA3Q53S33 107 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 ERMARDQ5T6L9 678 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.49■□□□□ 0.39
USP39-211ENST00000465282 WFIKKN2Q8TEU8 576 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 P2RY11Q96G91 374 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 FZD10Q9ULW2 581 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 MYO18AQ92614 2054 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 ATG2BQ96BY7 2078 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 E9PAM4 449 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 K7EQS6 105 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 NPC1O15118 1278 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 PI15O43692 258 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 PROSCO94903 275 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 EGFP01133 1207 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 DCNP07585 359 aaKnown RBP17.48■□□□□ 0.39
USP39-211ENST00000465282 MIPP30301 263 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 MAN1A1P33908 653 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 CDH4P55283 916 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 CDH18Q13634 790 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 NAIF1Q69YI7 327 aaPredicted RBP17.48■□□□□ 0.39
USP39-211ENST00000465282 RAD9BQ6WBX8 426 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 ANKS1BQ7Z6G8 1248 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 KIAA0907Q7Z7F0 614 aaPredicted RBP17.48■□□□□ 0.39
USP39-211ENST00000465282 MFN1Q8IWA4 741 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 ZNF683Q8IZ20 524 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 CFAP52Q8N1V2 620 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 ARFGAP1Q8N6T3 406 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 CCDC185Q8N715 623 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 DONSONQ9NYP3 566 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 KIAA1522Q9P206 1035 aaPredicted RBP17.48■□□□□ 0.39
USP39-211ENST00000465282 STIM2Q9P246 746 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 USP18Q9UMW8 372 aa17.48■□□□□ 0.39
USP39-211ENST00000465282 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.47■□□□□ 0.39
USP39-211ENST00000465282 BTNL10A8MVZ5 291 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 CHURC1-FNTBB4DL54 471 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 H0Y626 953 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 ARHGAP6O43182 974 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 KDSRQ06136 332 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 ZNF177Q13360 481 aaPredicted RBP17.47■□□□□ 0.39
USP39-211ENST00000465282 DMC1Q14565 340 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 HADHQ16836 314 aaKnown RBP17.47■□□□□ 0.39
USP39-211ENST00000465282 MANEALQ5VSG8 457 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 TRMT11Q7Z4G4 463 aaKnown RBP17.47■□□□□ 0.39
USP39-211ENST00000465282 C14orf80Q86SX3 495 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 CCAR2Q8N163 923 aaKnown RBP17.47■□□□□ 0.39
USP39-211ENST00000465282 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 TMEM105Q8N8V8 129 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 UCMAQ8WVF2 138 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 TEKT4Q8WW24 435 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 IGSF8Q969P0 613 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 MYEOVQ96EZ4 313 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 PRRX2Q99811 253 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 EPAS1Q99814 870 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 ZYG11BQ9C0D3 744 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 OSGEPQ9NPF4 335 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 TMPRSS4Q9NRS4 437 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 ZNF318Q5VUA4 2279 aa17.47■□□□□ 0.39
USP39-211ENST00000465282 PJA2O43164 708 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 PABPC1P11940 636 aaKnown RBP17.46■□□□□ 0.39
USP39-211ENST00000465282 HLA-FP30511 346 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 VAV2P52735 878 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 SETD3Q86TU7 594 aaPredicted RBP17.46■□□□□ 0.39
USP39-211ENST00000465282 SPEM1Q8N4L4 309 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 DTWD2Q8NBA8 298 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 EZH1Q92800 747 aaPredicted RBP17.46■□□□□ 0.39
USP39-211ENST00000465282 PCSK1NQ9UHG2 260 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 CLEC4EQ9ULY5 219 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 AP4E1Q9UPM8 1137 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 TBC1D30Q9Y2I9 924 aa17.46■□□□□ 0.39
USP39-211ENST00000465282 TRIM24O15164 1050 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 RNF40O75150 1001 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 LRIG2O94898 1065 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 MOCS3O95396 460 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 RHOQP17081 205 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 SLC1A1P43005 524 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 KIR2DL1P43626 348 aaPredicted RBP17.45■□□□□ 0.38
USP39-211ENST00000465282 PLK1P53350 603 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 MESP2Q0VG99 397 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 SEMA3BQ13214 749 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 KIAA1328Q86T90 577 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 USP33Q8TEY7 942 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 ACDQ96AP0 544 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 TBC1D31Q96DN5 1066 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 BTBD6Q96KE9 485 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 LMLNQ96KR4 655 aa17.45■□□□□ 0.38
USP39-211ENST00000465282 RBM12Q9NTZ6 932 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms