RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 GALNT15Q8N3T1 639 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PAQR4Q8N4S7 273 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-205ENST00000464541 MYCT1Q8N699 235 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 OR6Y1Q8NGX8 325 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 C16orf52Q8NHV5 167 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 C3orf49Q96BT1 292 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 TRAPPC9Q96Q05 1148 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 SLC29A3Q9BZD2 475 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PTPRHQ9HD43 1115 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 PAPOLBQ9NRJ5 636 aaKnown RBP6.66□□□□□ -1.34
PTCD3-205ENST00000464541 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 ZMYM2Q9UBW7 1377 aa6.66□□□□□ -1.34
PTCD3-205ENST00000464541 F8W810 466 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 HNRNPRO43390 633 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 RCAN1P53805 252 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 RNASELQ05823 741 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 GALNTL6Q49A17 601 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 C11orf87Q6NUJ2 197 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 MRPL10Q7Z7H8 261 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 NKAPQ8N5F7 415 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 ENDOVQ8N8Q3 282 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 EXD3Q8N9H8 876 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 SPATA5Q8NB90 893 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 CCT6BQ92526 530 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 PIGSQ96S52 555 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 TUBB6Q9BUF5 446 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 SORBS1Q9BX66 1292 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 MYLK2Q9H1R3 596 aa6.65□□□□□ -1.34
PTCD3-205ENST00000464541 SRP68Q9UHB9 627 aaKnown RBP6.65□□□□□ -1.34
PTCD3-205ENST00000464541 H0Y3Z8 333 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 IPO5O00410 1097 aaKnown RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 FAM155BO75949 473 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 ALDOCP09972 364 aaKnown RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 ZNF81P51508 661 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 KLF9Q13886 244 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 GPR162Q16538 588 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 JMJD6Q6NYC1 403 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 ANKRD13BQ86YJ7 626 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 WIPF2Q8TF74 440 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 IGFBPL1Q8WX77 278 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 THAP4Q8WY91 577 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 ATP2A3Q93084 1043 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 HERPUD2Q9BSE4 406 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 MOV10Q9HCE1 1003 aaKnown RBP6.64□□□□□ -1.35
PTCD3-205ENST00000464541 G6PC2Q9NQR9 355 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 LZTS1Q9Y250 596 aa6.64□□□□□ -1.35
PTCD3-205ENST00000464541 HMX3A6NHT5 357 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 PRPF4O43172 522 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 MOSPD3O75425 235 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 TFRCP02786 760 aaKnown RBP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 HOXD9P28356 352 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 PTGER1P34995 402 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 PLCD1P51178 756 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 DCTN1Q14203 1278 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 SMAD1Q15797 465 aaKnown RBP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 ZNF425Q6IV72 752 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 ARL14EPQ8N8R7 260 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 CLMNQ96JQ2 1002 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 ZNF347Q96SE7 839 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 TRMOQ9BU70 441 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 ABHD16BQ9H3Z7 469 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 TXNRD2Q9NNW7 524 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 TMEM45AQ9NWC5 275 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 TRNAU1APQ9NX07 287 aaKnown RBP6.63□□□□□ -1.35
PTCD3-205ENST00000464541 MTMR4Q9NYA4 1195 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 RIPOR2Q9Y4F9 1068 aa6.63□□□□□ -1.35
PTCD3-205ENST00000464541 LMTK3Q96Q04 1460 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 MCIDASD6RGH6 385 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 PPEF2O14830 753 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 HEXIM1O94992 359 aaKnown RBP6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ADPRHP54922 357 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 SHC2P98077 582 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ETFDHQ16134 617 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ISM2Q6H9L7 571 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 LRIG3Q6UXM1 1119 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ZNF793Q6ZN11 406 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 PTGR2Q8N8N7 351 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-205ENST00000464541 CLEC4CQ8WTT0 213 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 RUBCNQ92622 972 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ZFYVE19Q96K21 471 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ZNF778Q96MU6 729 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 ISCA1Q9BUE6 129 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 TWSG1Q9GZX9 223 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 TAF1DQ9H5J8 278 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-205ENST00000464541 PDE11AQ9HCR9 933 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
PTCD3-205ENST00000464541 TMEM184CQ9NVA4 438 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 AGO2Q9UKV8 859 aaKnown RBP6.62□□□□□ -1.35
PTCD3-205ENST00000464541 SLC8A2Q9UPR5 921 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 PCDHA10Q9Y5I2 948 aa6.62□□□□□ -1.35
PTCD3-205ENST00000464541 AGAP5A6NIR3 686 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 SEPT4O43236 478 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 POSTNQ15063 836 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 TWIST1Q15672 202 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 TIGD6Q17RP2 521 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 SHC4Q6S5L8 630 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 RASGRP2Q7LDG7 609 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms