RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 CHD9Q3L8U1 2897 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 CLUHO75153 1309 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 H3BNC9 293 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 C1RP00736 705 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 VAV1P15498 845 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 PBX2P40425 430 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 GALNT2Q10471 571 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 RNASEH2BQ5TBB1 312 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 RTL10Q7L3V2 364 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 CHSY1Q86X52 802 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 TMC8Q8IU68 726 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 ZNF683Q8IZ20 524 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 LZTR1Q8N653 840 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 RTL3Q8N8U3 475 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 SLC22A17Q8WUG5 538 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 MRPS31Q92665 395 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 ZYG11BQ9C0D3 744 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 BRD8Q9H0E9 1235 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 TSPYL1Q9H0U9 437 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 ACBD3Q9H3P7 528 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 ASAH2Q9NR71 780 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 MPP6Q9NZW5 540 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 PPARGC1AQ9UBK2 798 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 SHOC2Q9UQ13 582 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 ATP8A1Q9Y2Q0 1164 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 CCL16O15467 120 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 PPFIA2O75334 1257 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 STK10O94804 968 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 SLC11A2P49281 568 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 HS6ST3Q8IZP7 471 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 TAB3Q8N5C8 712 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 CELF6Q96J87 481 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 GCNAQ96QF7 691 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 PRMT1Q99873 361 aaKnown RBP19.55■□□□□ 0.72
CCDC78-206ENST00000463539 LRRC3Q9BY71 257 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 PBX4Q9BYU1 374 aa19.55■□□□□ 0.72
CCDC78-206ENST00000463539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 IGLV3-10A0A075B6K4 115 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 C5orf60A6NFR6 353 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CLASP2O75122 1294 aaKnown RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 GCATO75600 419 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 MBL2P11226 248 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 RHOQP17081 205 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CDC25CP30307 473 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 BASP1P80723 227 aaKnown RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 SLMAPQ14BN4 828 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 TXNDC8Q6A555 127 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 NADSYN1Q6IA69 706 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 FBXL22Q6P050 247 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 C4orf22Q6V702 233 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 GAREM2Q75VX8 874 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CCDC25Q86WR0 208 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 PPIL6Q8IXY8 311 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CCDC110Q8TBZ0 833 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 HDAC11Q96DB2 347 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 P2RY11Q96G91 374 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 RPRD1AQ96P16 312 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CORO1BQ9BR76 489 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 KLF16Q9BXK1 252 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 KLC2Q9H0B6 622 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 CERS4Q9HA82 394 aa19.54■□□□□ 0.72
CCDC78-206ENST00000463539 FARP1Q9Y4F1 1045 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-206ENST00000463539 WASH4PA8MWX3 477 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 ACSL4O60488 711 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 STC2O76061 302 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 TACR2P21452 398 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 GARSP41250 739 aaKnown RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CYP4F8P98187 520 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 PPIDQ08752 370 aaKnown RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 ZCCHC9Q8N567 271 aaKnown RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CPT1BQ92523 772 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 TXLNGYQ9BZA5 131 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 FOXP3Q9BZS1 431 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 SMPD4Q9NXE4 827 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 DONSONQ9NYP3 566 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 SEPT10Q9P0V9 454 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CHD7Q9P2D1 2997 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 A0A0A0MRY4 1105 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 F5H5T6 163 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 RNF103O00237 685 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 OLFM2O95897 454 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 IRF1P10914 325 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 EPCAMP16422 314 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CHKAP35790 457 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 HSD17B3P37058 310 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 ARHGEF18Q6ZSZ5 1173 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 HOOK3Q86VS8 718 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 NLRP14Q86W24 1093 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 DENND1CQ8IV53 801 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 UBLCP1Q8WVY7 318 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 PRCCQ92733 491 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-206ENST00000463539 IGSF8Q969P0 613 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 SPATA13Q96N96 652 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 SLC22A12Q96S37 553 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 CYP2S1Q96SQ9 504 aa19.53■□□□□ 0.72
CCDC78-206ENST00000463539 GDF15Q99988 308 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms