RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CARNMT1Q8N4J0 409 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 HDDC3Q8N4P3 179 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 TMEM35BQ8NCS4 154 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 C1orf131Q8NDD1 294 aaKnown RBP7.54□□□□□ -1.2
PTPRF-210ENST00000463041 ZNF397Q8NF99 534 aaPredicted RBP7.54□□□□□ -1.2
PTPRF-210ENST00000463041 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
PTPRF-210ENST00000463041 WFDC5Q8TCV5 224 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 RNF34Q969K3 372 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 ERLEC1Q96DZ1 483 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 HSPA12BQ96MM6 686 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 SLC2A13Q96QE2 648 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 CPXM1Q96SM3 734 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 GPR174Q9BXC1 333 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 NUCKS1Q9H1E3 243 aaKnown RBP7.54□□□□□ -1.2
PTPRF-210ENST00000463041 PDCL3Q9H2J4 239 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 SLC32A1Q9H598 525 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 PRSS16Q9NQE7 514 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 SCML1Q9UN30 329 aa7.54□□□□□ -1.2
PTPRF-210ENST00000463041 MAP1BP46821 2468 aaKnown RBP7.54□□□□□ -1.2
PTPRF-210ENST00000463041 A0A1B0GTW7 788 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 F5H5T6 163 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 OPHN1O60890 802 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 RNASEH1O60930 286 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 LUC7L3O95232 432 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 MOCS2O96007 188 aaPredicted RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 F9P00740 461 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DNTTP04053 509 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 TPM2P07951 284 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 KCNA4P22459 653 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 MAOBP27338 520 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PMLP29590 882 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 CDH5P33151 784 aaPredicted RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 NNMTP40261 264 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 CSKP41240 450 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 MAPK8P45983 427 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 GABRB2P47870 512 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 NOVA1P51513 510 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 RPS14P62263 151 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SHC2P98077 582 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SULT2A1Q06520 285 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SEMA3BQ13214 749 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SLC14A1Q13336 389 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 CDH18Q13634 790 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 HNRNPDQ14103 355 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 HNRNPA1L2Q32P51 320 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 FSCBQ5H9T9 825 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 RABGAP1LQ5R372 815 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 ACBD5Q5T8D3 534 aaPredicted RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SH3PXD2AQ5TCZ1 1133 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 TTC39BQ5VTQ0 682 aaPredicted RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DCAF12L1Q5VU92 463 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 RAP1GAP2Q684P5 730 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PSAPL1Q6NUJ1 521 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SLC26A9Q7LBE3 791 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PIP4P1Q86T03 277 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SLC47A2Q86VL8 602 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 CHSY1Q86X52 802 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PASD1Q8IV76 773 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 C18orf8Q96DM3 657 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 MYEOVQ96EZ4 313 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 GBP4Q96PP9 640 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PRMT1Q99873 361 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 GTPBP2Q9BX10 602 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 NAA15Q9BXJ9 866 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 STK33Q9BYT3 514 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SYNCQ9H7C4 482 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SGK2Q9HBY8 427 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 CD93Q9NPY3 652 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PLCB1Q9NQ66 1216 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 SAMSN1Q9NSI8 373 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DDIT4Q9NX09 232 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 AJAP1Q9UKB5 411 aaPredicted RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 ANGPTL2Q9UKU9 493 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 INTS6Q9UL03 887 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 ERVW-1Q9UQF0 538 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 NCKAP1Q9Y2A7 1128 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 GOLGA4Q13439 2230 aaKnown RBP7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DOCK4Q8N1I0 1966 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 DOCK9Q9BZ29 2069 aa7.53□□□□□ -1.2
PTPRF-210ENST00000463041 PCDH15Q96QU1 1955 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MEI4A8MW99 385 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 GOLGA6L22H0YM25 854 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 M0QYT0 321 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 BCAT2O15382 392 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 GRAP2O75791 330 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ERBB2P04626 1255 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 UCHL3P15374 230 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 CYP11B1P15538 503 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 SCNN1AP37088 669 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MATKP42679 507 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 VASPP50552 380 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PITX1P78337 314 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 RAPGEF1Q13905 1077 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms