RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	TMEM88	Q6PEY1	159 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	RAB11FIP2	Q7L804	512 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ADGRF4	Q8IZF3	695 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ADGRF3	Q8IZF5	1079 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	NRAC	Q8N912	160 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	FAM47B	Q8NA70	645 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	OR52N4	Q8NGI2	321 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	HMGB4	Q8WW32	186 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	HMCES	Q96FZ2	354 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZFYVE19	Q96K21	471 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZNF347	Q96SE7	839 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	SFXN1	Q9H9B4	322 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	PRDM8	Q9NQV8	689 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	LRFN1	Q9P244	771 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	HEY2	Q9UBP5	337 aa		4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	IPO11	Q9UI26	975 aa	Known RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3A-208	ENST00000463013	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	LY6G6E	A0A0G2JKS1	128 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	EFCAB8	A8MWE9	144 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	TMEM191B	P0C7N4	346 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	CYP3A7	P24462	503 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	PNLIPRP1	P54315	467 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	AP2B1	P63010	937 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	SHC2	P98077	582 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	B4GALNT1	Q00973	533 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	RNASEL	Q05823	741 aa	Known RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	OS9	Q13438	667 aa	Predicted RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	MTX1	Q13505	466 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	KRT72	Q14CN4	511 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	PGM5	Q15124	567 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	KLHL22	Q53GT1	634 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	NFRKB	Q6P4R8	1299 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	KLHL17	Q6TDP4	642 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	CACNA2D3	Q8IZS8	1091 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	EXD3	Q8N9H8	876 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	STT3B	Q8TCJ2	826 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	PIMREG	Q9BSJ6	248 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	TRMO	Q9BU70	441 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	TUBB6	Q9BUF5	446 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	HTATIP2	Q9BUP3	242 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	PABPC3	Q9H361	631 aa	Known RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	MLXIP	Q9HAP2	919 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	LIN7C	Q9NUP9	197 aa	Known RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	DAPP1	Q9UN19	280 aa		4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.21	□□□□□ -1.74
KDM3A-208	ENST00000463013	TRBV5-3	A0A0A0MS03	114 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TLX3	O43711	291 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	UGDH	O60701	494 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	ALDOC	P09972	364 aa	Known RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	FOXO1	Q12778	655 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TRIM14	Q14142	442 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TBRG1	Q3YBR2	411 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	CCDC38	Q502W7	563 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TTC22	Q5TAA0	569 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TANGO2	Q6ICL3	276 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	ARFGAP1	Q8N6T3	406 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	ENAH	Q8N8S7	591 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	SCAMP5	Q8TAC9	235 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	MPLKIP	Q8TAP9	179 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	CLEC4C	Q8WTT0	213 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	TMEM120A	Q9BXJ8	343 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	ELAC1	Q9H777	363 aa	Known RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	AGO2	Q9UKV8	859 aa	Known RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	HS3ST3B1	Q9Y662	390 aa		4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	COPG1	Q9Y678	874 aa	Known RBP	4.2	□□□□□ -1.74
KDM3A-208	ENST00000463013	LMTK3	Q96Q04	1460 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	PRPF4	O43172	522 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	IGKV2-30	P06310	120 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	ME1	P48163	572 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	TWIST1	Q15672	202 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	MIDN	Q504T8	468 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	KIAA1755	Q5JYT7	1200 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	SULT6B1	Q6IMI4	303 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	LRIG3	Q6UXM1	1119 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	RINL	Q6ZS11	566 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	CPT1B	Q92523	772 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	ATP2A3	Q93084	1043 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	ZBTB9	Q96C00	473 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	LTV1	Q96GA3	475 aa	Predicted RBP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	RPS6KC1	Q96S38	1066 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	SORBS1	Q9BX66	1292 aa	Known RBP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	KRTAP2-2	Q9BYT5	123 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	BRD8	Q9H0E9	1235 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	MAGEH1	Q9H213	219 aa		4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	FOXP1	Q9H334	677 aa	Predicted RBP	4.19	□□□□□ -1.74
KDM3A-208	ENST00000463013	TXNRD2	Q9NNW7	524 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms