RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PLIN3O60664 434 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 F7P08709 466 aaPredicted RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 PTPN1P18031 435 aaKnown RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 IGFBP6P24592 240 aaPredicted RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 TYK2P29597 1187 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 VHLP40337 213 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 TKTL1P51854 596 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 GRB14Q14449 540 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 SNX30Q5VWJ9 437 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 CCNJLQ8IV13 435 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 PSTKQ8IV42 348 aaKnown RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 OR52K1Q8NGK4 314 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 CLPTM1LQ96KA5 538 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 NPY6RQ99463 290 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 THTPAQ9BU02 230 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 DCDC2Q9UHG0 476 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 IPPQ9Y573 584 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 FAM72CH0Y354 149 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 TBX10O75333 385 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 SERPINA6P08185 405 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 KCNE1P15382 129 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 AXLP30530 894 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 GTF2A2P52657 109 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 PCBP1Q15365 356 aaKnown RBP eCLIP17.38■□□□□ 0.375e-27■■■■■ 34.2
ACTB-207ENST00000462494 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 FAM72AQ5TYM5 149 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 FAM72DQ6L9T8 149 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 CLEC20AQ6ZU45 233 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 FAM72BQ86X60 149 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 C10orf107Q8IVU9 208 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 PIWIL2Q8TC59 973 aaKnown RBP17.38■□□□□ 0.37
ACTB-207ENST00000462494 WNT8BQ93098 351 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 ZNF778Q96MU6 729 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 OSBPL1AQ9BXW6 950 aa17.38■□□□□ 0.37
ACTB-207ENST00000462494 F2P00734 622 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
ACTB-207ENST00000462494 PAX7P23759 505 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 SLC34A1Q06495 639 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 BLMHQ13867 455 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 MFSD10Q14728 455 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 PCLAFQ15004 111 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 STXBP5Q5T5C0 1151 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 TEDDM1Q5T9Z0 273 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 PAQR9Q6ZVX9 377 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 SCUBE1Q8IWY4 988 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 NRG4Q8WWG1 115 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 CERS2Q96G23 380 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 NAT9Q9BTE0 207 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 KRT82Q9NSB4 513 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 MBLAC1A4D2B0 266 aaPredicted RBP17.37■□□□□ 0.37
ACTB-207ENST00000462494 MEI4A8MW99 385 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 NRP1O14786 923 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 CDK18Q07002 472 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 DPYSQ14117 519 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 PAFAH1B3Q15102 231 aaKnown RBP17.37■□□□□ 0.37
ACTB-207ENST00000462494 TWF2Q6IBS0 349 aaKnown RBP17.37■□□□□ 0.37
ACTB-207ENST00000462494 PLEKHH3Q7Z736 793 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 CMC1Q7Z7K0 106 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 LMNTD2Q8IXW0 634 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 TOP6BLQ8N6T0 577 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 DNAAF3Q8N9W5 541 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 PPP4R1Q8TF05 950 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 NT5C3BQ969T7 300 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 ZFP42Q96MM3 310 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 FCRL3Q96P31 734 aaPredicted RBP17.37■□□□□ 0.37
ACTB-207ENST00000462494 ZNF358Q9NW07 568 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 TMEM216Q9P0N5 145 aa17.37■□□□□ 0.37
ACTB-207ENST00000462494 MAGEC1O60732 1142 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 SMNDC1O75940 238 aaKnown RBP eCLIP17.36■□□□□ 0.373e-14■■■■□ 20.3
ACTB-207ENST00000462494 ERCC2P18074 760 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 LRRC74BQ6ZQY2 392 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 LIMS2Q7Z4I7 341 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 SMG8Q8ND04 991 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 SCG3Q8WXD2 468 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 ZNF669Q96BR6 464 aaPredicted RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 ULBP1Q9BZM6 244 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 PRDM16Q9HAZ2 1276 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 PNPOQ9NVS9 261 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 IGSF9Q9P2J2 1179 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 APOBEC2Q9Y235 224 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 DCLK1O15075 740 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 CIB2O75838 187 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 SERPINE1P05121 402 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 ACADSP16219 412 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 GP5P40197 560 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 GARSP41250 739 aaKnown RBP17.36■□□□□ 0.37
ACTB-207ENST00000462494 RAP1GDS1P52306 607 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 TPI1P60174 286 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 NAB1Q13506 487 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 XKR4Q5GH76 650 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 KIAA0319Q5VV43 1072 aa17.36■□□□□ 0.37
ACTB-207ENST00000462494 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms