RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 MYO6Q9UM54 1294 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS36-202ENST00000462289 KMT2EQ8IZD2 1858 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 MYO18AQ92614 2054 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 MUC6Q6W4X9 2439 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 FANCMQ8IYD8 2048 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 C2CD4DB7Z1M9 353 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 F8VP50 259 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 F8VZ95 297 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 ARNTLO00327 626 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 FOXN3O00409 490 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 CLDN5O00501 218 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 PRRG1O14668 218 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 CCL16O15467 120 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 TEX33O43247 280 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 SOAT2O75908 522 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 FGF19O95750 216 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 OAS1P00973 400 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 CSH1P0DML2 217 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 CSH2P0DML3 217 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 VDRP11473 427 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 PTPN2P17706 415 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 BDNFP23560 247 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 GPD2P43304 727 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 MTIF2P46199 727 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 PPP3CCP48454 512 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 GPR15P49685 360 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 KIF11P52732 1056 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 EPHB3P54753 998 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 EIF4EBP2Q13542 120 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 CAMK2GQ13555 558 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 HTR4Q13639 388 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 ZNF268Q14587 947 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 NR0B2Q15466 257 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 STILQ15468 1287 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 PABPC1LQ4VXU2 614 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 IQCEQ6IPM2 695 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 GJB7Q6PEY0 223 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 KLHDC10Q6PID8 442 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 SCARA5Q6ZMJ2 495 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 BEND5Q7L4P6 421 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 CCDC186Q7Z3E2 898 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 GRASPQ7Z6J2 395 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 ITIH5Q86UX2 942 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 LUZP1Q86V48 1076 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 LILRA2Q8N149 483 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 RBBP8NLQ8NC74 664 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 CCDC150Q8NCX0 1101 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 ITFG1Q8TB96 612 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 SLC2A14Q8TDB8 520 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 FGF13Q92913 245 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 CRELD1Q96HD1 420 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 KCNK16Q96T55 309 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 LHX5Q9H2C1 402 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 TRPV5Q9NQA5 729 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 OBP2AQ9NY56 170 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 TAB2Q9NYJ8 693 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 MAGEC2Q9UBF1 373 aaPredicted RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 NOCTQ9UK39 431 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 CDH7Q9ULB5 785 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 SCML2Q9UQR0 700 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 R3HCC1Q9Y3T6 440 aaKnown RBP6.05□□□□□ -1.44
VPS36-202ENST00000462289 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
VPS36-202ENST00000462289 ATP8B3O60423 1300 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 MIA3Q5JRA6 1907 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ZNF840PA6NDX5 716 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 SHISA7A6NL88 538 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 SLC38A8A6NNN8 435 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ZNF197O14709 1029 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 XPO1O14980 1071 aaKnown RBP6.04□□□□□ -1.44
VPS36-202ENST00000462289 GREM1O60565 184 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ECI2O75521 394 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 CSPG5O95196 566 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 BPNT1O95861 308 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 LRG1P02750 347 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 SETSIPP0DME0 302 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 CCDC130P13994 396 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 CEBPBP17676 345 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 DDX6P26196 483 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS36-202ENST00000462289 CDC25CP30307 473 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 HNRNPH3P31942 346 aaKnown RBP6.04□□□□□ -1.44
VPS36-202ENST00000462289 ELF1P32519 619 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 PRKCIP41743 596 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ALDH1A3P47895 512 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 SLC5A3P53794 718 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 BCAT1P54687 386 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 MFAP3P55082 362 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
VPS36-202ENST00000462289 GSCP56915 257 aaPredicted RBP6.04□□□□□ -1.44
VPS36-202ENST00000462289 NTHL1P78549 312 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 SLC7A9P82251 487 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 ZXDBP98169 803 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 EGR3Q06889 387 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 FCHO2Q0JRZ9 810 aa6.04□□□□□ -1.44
VPS36-202ENST00000462289 BST2Q10589 180 aaKnown RBP6.04□□□□□ -1.44
VPS36-202ENST00000462289 SYCP1Q15431 976 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms