RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 FAM163BP0C2L3 166 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 DRD4P21917 467 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 CYP3A7P24462 503 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 GALNSP34059 522 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 LIFRP42702 1097 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 RAE1P78406 368 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 MPP1Q00013 466 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 PSG6Q00889 435 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 G3BP1Q13283 466 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLK1-206ENST00000461326 PDCLQ13371 301 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 DLGAP5Q15398 846 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 HYIQ5T013 277 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 CEP85Q6P2H3 762 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 KIRREL2Q6UWL6 708 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 C16orf89Q6UX73 402 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 LRRC8DQ7L1W4 858 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 MAATS1Q7Z4T9 603 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 LAS2Q8IYD9 372 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 ENDOVQ8N8Q3 282 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 NOC3LQ8WTT2 800 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 MCRS1Q96EZ8 462 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 TRMT61AQ96FX7 289 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 LENG8Q96PV6 779 aaPredicted RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 PPP1R10Q96QC0 940 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 FYTTD1Q96QD9 318 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 MMS19Q96T76 1030 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 HTATIP2Q9BUP3 242 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 USP29Q9HBJ7 922 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 PDE11AQ9HCR9 933 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 ABHD10Q9NUJ1 306 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 SLC17A6Q9P2U8 582 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 ZNF70Q9UC06 446 aaPredicted RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 ASAP1Q9ULH1 1129 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 MAFFQ9ULX9 164 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 SLC12A4Q9UP95 1085 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 PCDHB2Q9Y5E7 798 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 ENTPD2Q9Y5L3 495 aa4.23□□□□□ -1.73
CLK1-206ENST00000461326 COPG1Q9Y678 874 aaKnown RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 SIRT4Q9Y6E7 314 aaPredicted RBP4.23□□□□□ -1.73
CLK1-206ENST00000461326 SALL3Q9BXA9 1300 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 H3BNC9 293 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 M0QYT0 321 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 ANP32CO43423 234 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 ELFN1P0C7U0 828 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 CHN1P15882 459 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 MAN1A1P33908 653 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 ARL1P40616 181 aaPredicted RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 GPD2P43304 727 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 FOXL2P58012 376 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 WDR5P61964 334 aaKnown RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 LMOD3Q0VAK6 560 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 CNGA3Q16281 694 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 RNASE12Q5GAN4 147 aaKnown RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 PCID2Q5JVF3 399 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 ZNF484Q5JVG2 852 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 WDR45BQ5MNZ6 344 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 CBWD5Q5RIA9 395 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 LIPMQ5VYY2 423 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 KIAA1614Q5VZ46 1190 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 VSTM1Q6UX27 236 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 SLC39A5Q6ZMH5 540 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLK1-206ENST00000461326 HDAC2Q92769 488 aaKnown RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
CLK1-206ENST00000461326 HS6ST2Q96MM7 605 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 ADGRE3Q9BY15 652 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 CIPCQ9C0C6 399 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 PRDM16Q9HAZ2 1276 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 PLEKHA2Q9HB19 425 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 FOXJ2Q9P0K8 574 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 SEMA5BQ9P283 1151 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 RAB21Q9UL25 225 aa4.22□□□□□ -1.73
CLK1-206ENST00000461326 AGAP5A6NIR3 686 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 CGB1A6NKQ9 187 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 B4E171 279 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 TISP43B9A030 160 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 ZNF213O14771 459 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 PRAMEF2O60811 474 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 BAIAP3O94812 1187 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 METTL18O95568 372 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 MT-CO3P00414 261 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 MBPP02686 304 aaPredicted RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 CYP21A2P08686 494 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 APEHP13798 732 aaKnown RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 WT1P19544 449 aaPredicted RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 ITPKBP27987 946 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 TSPAN7P41732 249 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 RXRGP48443 463 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 SIM2Q14190 667 aaPredicted RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 KCNB1Q14721 858 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 LARS2Q15031 903 aaKnown RBP4.21□□□□□ -1.74
CLK1-206ENST00000461326 GPR68Q15743 365 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 BAK1Q16611 211 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 WDR78Q5VTH9 848 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 ZNF425Q6IV72 752 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 TRIM72Q6ZMU5 477 aa4.21□□□□□ -1.74
CLK1-206ENST00000461326 PTF1AQ7RTS3 328 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms