RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 GBE1Q04446 702 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 PGM5Q15124 567 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 TGFBIQ15582 683 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 DCAF6Q58WW2 860 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 PIGGQ5H8A4 983 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 POTEAQ6S8J7 498 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 EPGNQ6UW88 154 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 CYP4V2Q6ZWL3 525 aaPredicted RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 LZTR1Q8N653 840 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 TDRD5Q8NAT2 981 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 PDCD6IPQ8WUM4 868 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 IRGQQ8WZA9 623 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 IDI2Q9BXS1 227 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 NGRNQ9NPE2 291 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 CCDC78A2IDD5 438 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 K7ERI5 159 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ADAM23O75077 832 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ATE1O95260 518 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ASS1P00966 412 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 FUCA1P04066 466 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ZNF23P17027 643 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 PRKCEQ02156 737 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 CDK18Q07002 472 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 LSM12Q3MHD2 195 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ARL10Q8N8L6 244 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ACVR1CQ8NER5 493 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 ADCY4Q8NFM4 1077 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 CERKQ8TCT0 537 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 C12orf43Q96C57 262 aaKnown RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 RMDN3Q96TC7 470 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 OSBPL6Q9BZF3 934 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 CDH19Q9H159 772 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 RSAD1Q9HA92 442 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 WDR41Q9HAD4 459 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 OLAHQ9NV23 265 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 MKS1Q9NXB0 559 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 PLK2Q9NYY3 685 aa12□□□□□ -0.49
CPSF3-202ENST00000460593 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
CPSF3-202ENST00000460593 GLRA3O75311 464 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 STBD1O95210 358 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 IL4RP24394 825 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 MGAT1P26572 445 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 RGS7P49802 495 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ATXN1P54253 815 aaKnown RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PFKPQ01813 784 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 RELAQ04206 551 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 CHST15Q7LFX5 561 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 FAM47BQ8NA70 645 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ABHD8Q96I13 439 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 RNF157Q96PX1 679 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ADPGKQ9BRR6 497 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PCDHA11Q9Y5I1 949 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PRSS51A0A1B0GVH4 220 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 A0A1W2PPW3 197 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PSMD12O00232 456 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 H6PDO95479 791 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ALOX15P16050 662 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 UGT1A6P19224 532 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 RPL26P61254 145 aaKnown RBP11.99□□□□□ -0.49
CPSF3-202ENST00000460593 FSTL1Q12841 308 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 STILQ15468 1287 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 FSCBQ5H9T9 825 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 LAYNQ6UX15 382 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 RXFP2Q8WXD0 754 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 ISOC1Q96CN7 298 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PLGRKTQ9HBL7 147 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 SLC38A7Q9NVC3 462 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 EFR3BQ9Y2G0 817 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 PCDHA10Q9Y5I2 948 aa11.99□□□□□ -0.49
CPSF3-202ENST00000460593 TMEM233B4DJY2 109 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 K7EPI3 171 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 NRP1O14786 923 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 PORP16435 677 aaPredicted RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 HALP42357 657 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 OXCT1P55809 520 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 MTA1Q13330 715 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 PITRM1Q5JRX3 1037 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 FERMT1Q9BQL6 677 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 TRNAU1APQ9NX07 287 aaKnown RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 RBMX2Q9Y388 322 aaKnown RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 GOLGA8TH3BQL2 631 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 FBP2O00757 339 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 SERPINB7O75635 380 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 ATG7O95352 703 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 ZBTB11O95625 1053 aaPredicted RBP11.98□□□□□ -0.49
CPSF3-202ENST00000460593 PDGFRAP16234 1089 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 GLRBP48167 497 aa11.98□□□□□ -0.49
CPSF3-202ENST00000460593 TGFB2P61812 414 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms