RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LRRD1A4D1F6 860 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 DRGXA6NNA5 263 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 E9PAM4 449 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 H0Y626 953 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 NCAM2O15394 837 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 TJP3O95049 919 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 KRT1P04264 644 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 ALADP13716 330 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 TNNT1P13805 278 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 RHOQP17081 205 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 TFE3P19532 575 aaPredicted RBP11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 GJC1P36383 396 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 GNG11P61952 73 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 ZXDBP98169 803 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 PRKCQQ04759 706 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 GRM2Q14416 872 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 DMC1Q14565 340 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 KCNT1Q5JUK3 1230 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 OTUD1Q5VV17 481 aaPredicted RBP11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 FBXL22Q6P050 247 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 TPGS1Q6ZTW0 290 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 NT5DC3Q86UY8 548 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 LRRC49Q8IUZ0 686 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 CCDC50Q8IVM0 306 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 MFN1Q8IWA4 741 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 REXO1L1PQ8IX06 675 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 CCDC185Q8N715 623 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 LRRC57Q8N9N7 239 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 UCMAQ8WVF2 138 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 KIAA1522Q9P206 1035 aaPredicted RBP11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 WNT16Q9UBV4 365 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 HPCAL4Q9UM19 191 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 SLC8A2Q9UPR5 921 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 PTPRDP23468 1912 aa11.36□□□□□ -0.59
SMNDC1-203ENST00000460483 IGLV3-10A0A075B6K4 115 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 CTAGE9A4FU28 777 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 GREM1O60565 184 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TBL1XO60907 577 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 LUC7L3O95232 432 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 PENKP01210 267 aaPredicted RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TYRP14679 529 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 MX2P20592 715 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 OR1E1P30953 314 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 NNMTP40261 264 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 ATXN1P54253 815 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 YBEYP58557 167 aaPredicted RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 SULT2A1Q06520 285 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 SMTNL2Q2TAL5 461 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 C5orf22Q49AR2 442 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TFDP3Q5H9I0 405 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 LY6G5CQ5SRR4 150 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 SEL1L2Q5TEA6 688 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 RHBDF2Q6PJF5 856 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 METTL3Q86U44 580 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 PRMT1Q99873 361 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 CARD9Q9H257 536 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 LINC00597Q9H2U6 94 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TRIM10Q9UDY6 481 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 SALL4Q9UJQ4 1053 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 PYCARDQ9ULZ3 195 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 TFR2Q9UP52 801 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 RAD54BQ9Y620 910 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 PATJQ8NI35 1801 aa11.35□□□□□ -0.59
SMNDC1-203ENST00000460483 MYO7AQ13402 2215 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CXorf51AA0A1B0GTR3 108 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 NPC1O15118 1278 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CACNG3O60359 315 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 TSPAN3O60637 253 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 RAMP2O60895 175 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 LRIG2O94898 1065 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 FTCDO95954 541 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CYP17A1P05093 508 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 TCP1P17987 556 aaKnown RBP11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 DRD1P21728 446 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 KDELR1P24390 212 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 NR2C2P49116 596 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 DGKGP49619 791 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 NDST2P52849 883 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 EIF4HQ15056 248 aaKnown RBP11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 PARP15Q460N3 678 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 FBXO43Q4G163 708 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 TMCO4Q5TGY1 634 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 MEI1Q5TIA1 1274 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms