RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MOCS3O95396 460 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 CHRM1P11229 460 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 KRT3P12035 628 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 HLA-FP30511 346 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 SGSHP51688 502 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 OXCT1P55809 520 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 RPS24P62847 133 aaKnown RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 N4BP2L1Q5TBK1 243 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 LRSAM1Q6UWE0 723 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 CHST9Q7L1S5 443 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 C12orf50Q8NA57 414 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 HMGB4Q8WW32 186 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 PRICKLE1Q96MT3 831 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 PPP1R9BQ96SB3 815 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 TBCBQ99426 244 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 GABRG3Q99928 467 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 SMOC1Q9H4F8 434 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 METTL5Q9NRN9 209 aaKnown RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 CACNA2D2Q9NY47 1150 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 XPO7Q9UIA9 1087 aaKnown RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 ANGPTL2Q9UKU9 493 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 STON1Q9Y6Q2 735 aa15.45■□□□□ 0.06
ATG4B-213ENST00000460211 MYO18AQ92614 2054 aaKnown RBP15.45■□□□□ 0.06
ATG4B-213ENST00000460211 CBFA2T2O43439 604 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 LUC7L3O95232 432 aaKnown RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 PDGFRAP16234 1089 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 DESP17661 470 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 POLR2EP19388 210 aaKnown RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 SDC4P31431 198 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 RDXP35241 583 aaKnown RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 FLT3P36888 993 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 CXCR3P49682 368 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 GSCP56915 257 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 RNF43Q68DV7 783 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 ACAD10Q6JQN1 1059 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 PHLDB2Q86SQ0 1253 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 CFAP52Q8N1V2 620 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 SPACA7Q96KW9 195 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 RPRD1AQ96P16 312 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 ACOX2Q99424 681 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 TKTL2Q9H0I9 626 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 PIGVQ9NUD9 493 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 ARHGEF38Q9NXL2 777 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 KIAA1522Q9P206 1035 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-213ENST00000460211 HCN2Q9UL51 889 aa15.44■□□□□ 0.06
ATG4B-213ENST00000460211 CHD6Q8TD26 2715 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 A0A1W2PQJ5 194 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 PAGE1O75459 146 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 RHOBTB1O94844 696 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 DLDP09622 509 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 AUHQ13825 339 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 ELF2Q15723 593 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 FNDC3BQ53EP0 1204 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 MBLAC2Q68D91 279 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 DNAJC24Q6P3W2 148 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 SERPINA13PQ6UXR4 307 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 LRRC31Q6UY01 552 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 KIAA0907Q7Z7F0 614 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 C3orf20Q8ND61 904 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 RXFP2Q8WXD0 754 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 LOXL4Q96JB6 756 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 VCPIP1Q96JH7 1222 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 CFAP57Q96MR6 1250 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 PRMT1Q99873 361 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 SIK2Q9H0K1 926 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.43■□□□□ 0.069e-9■■□□□ 12.8
ATG4B-213ENST00000460211 HS3ST4Q9Y661 456 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 BZW2Q9Y6E2 419 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 CNOT1A5YKK6 2376 aaKnown RBP15.43■□□□□ 0.06
ATG4B-213ENST00000460211 SPAG17Q6Q759 2223 aa15.43■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 A0A1B0GVM2 712 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 A0A1W2PQF6 199 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 TCAF2A6NFQ2 919 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 SIGLEC16A6NMB1 481 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 FOXD2O60548 495 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ASLP04424 464 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 TFE3P19532 575 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 CD70P32970 193 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 PBX1P40424 430 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 PRKCIP41743 596 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ST8SIA6P61647 398 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ZBED6P86452 979 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ATP11AP98196 1134 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 LMAN2Q12907 356 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 PTP4A2Q12974 167 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF177Q13360 481 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-213ENST00000460211 SLC12A1Q13621 1099 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ZNF234Q14588 700 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 ARL13BQ3SXY8 428 aa15.42■□□□□ 0.06
ATG4B-213ENST00000460211 TMEM215Q68D42 235 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms