RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TBC1D31Q96DN5 1066 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 MAELQ96JY0 434 aaKnown RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 SLC2A13Q96QE2 648 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 SMC6Q96SB8 1091 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 NPY6RQ99463 290 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 CWH43Q9H720 699 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 FKBP14Q9NWM8 211 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 LZTS1Q9Y250 596 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 ZNF254O75437 659 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 EN2P19622 333 aaPredicted RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 PTGIRP43119 386 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 PITX1P78337 314 aaPredicted RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 KRT17Q04695 432 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 MMRN1Q13201 1228 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 MSLNQ13421 630 aaPredicted RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 CRY1Q16526 586 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 USP41Q3LFD5 358 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 PM20D1Q6GTS8 502 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 KIAA1841Q6NSI8 718 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 KCNT2Q6UVM3 1135 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 PRSS55Q6UWB4 352 aaPredicted RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 TAS1R1Q7RTX1 841 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 ATAD1Q8NBU5 361 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 PPP1R14CQ8TAE6 165 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 AENQ8WTP8 325 aaKnown RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 IRGQQ8WZA9 623 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 EDEM1Q92611 657 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 NT5C3BQ969T7 300 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 IGSF21Q96ID5 467 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 YME1L1Q96TA2 773 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 MCOLN1Q9GZU1 580 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 DHX35Q9H5Z1 703 aaKnown RBP10.69□□□□□ -0.7
HERC4-207ENST00000460168 FAM204AQ9H8W3 233 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 FAM114A2Q9NRY5 505 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 SFMBT1Q9UHJ3 866 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 AP4E1Q9UPM8 1137 aa10.69□□□□□ -0.7
HERC4-207ENST00000460168 ZBBXA8MT70 800 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 PFDN1O60925 122 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 FYNP06241 537 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 S100A1P23297 94 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 NFKBIAP25963 317 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 DDR2Q16832 855 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ZNF362Q5T0B9 420 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 BSPRYQ5W0U4 402 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 BBS12Q6ZW61 710 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 GSTA5Q7RTV2 222 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 CCDC185Q8N715 623 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ADAM32Q8TC27 787 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 DYDC1Q8WWB3 177 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SGCDQ92629 289 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SLCO2A1Q92959 643 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ZNF689Q96CS4 500 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 TMEM169Q96HH4 297 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SRPK1Q96SB4 655 aaKnown RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 NDNQ99608 321 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 IL23AQ9NPF7 189 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ATAD3AQ9NVI7 634 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 IL20Q9NYY1 176 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SAE1Q9UBE0 346 aaPredicted RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 GGA2Q9UJY4 613 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 DNPEPQ9ULA0 475 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 MKL2Q9ULH7 1088 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 CDY1Q9Y6F8 540 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 USP3Q9Y6I4 520 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 PATJQ8NI35 1801 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 GOLGA6L7A0A1B0GV03 622 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 C2CD2LO14523 706 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 LIASO43766 372 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 KCNJ13O60928 360 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ENDOD1O94919 500 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 OTUD4Q01804 1114 aaKnown RBP10.68□□□□□ -0.7
HERC4-207ENST00000460168 LMNB2Q03252 620 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 GPR17Q13304 367 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 TFDP2Q14188 446 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 CASP8Q14790 479 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 TAZQ16635 292 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 CA9Q16790 459 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 MGAT5BQ3V5L5 792 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ACCSLQ4AC99 568 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SDHAF4Q5VUM1 108 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 DUPD1Q68J44 220 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ALKBH2Q6NS38 261 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ZNF365Q70YC5 407 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SND1Q7KZF4 910 aaKnown RBP eCLIP10.68□□□□□ -0.7
HERC4-207ENST00000460168 BHLHA9Q7RTU4 235 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ZNF554Q86TJ5 538 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SCML4Q8N228 414 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 TTC9BQ8N6N2 239 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 TTC13Q8NBP0 860 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
HERC4-207ENST00000460168 SPPL2BQ8TCT7 592 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms