RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 RRN3Q9NYV6 651 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 PLA2G4CQ9UP65 541 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 F5H5T6 163 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 M0QYT0 321 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CYP1A1P04798 512 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 ATP5BP06576 529 aaKnown RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CHRNB2P17787 502 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 FMO1Q01740 532 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CDR2Q01850 454 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 RPL6Q02878 288 aaKnown RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 UBXN1Q04323 297 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 MTA1Q13330 715 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CDH18Q13634 790 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 FNDC3BQ53EP0 1204 aaKnown RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 TMPRSS6Q8IU80 811 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 CPA5Q8WXQ8 436 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 PIGKQ92643 395 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 RNF34Q969K3 372 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 TMEM74BQ9NUR3 256 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHANK2-213ENST00000460048 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
SHANK2-213ENST00000460048 PATE3B3GLJ2 98 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 IGLV3-19P01714 112 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 ASLP04424 464 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 ATP1A3P13637 1013 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 TFE3P19532 575 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 CSKP41240 450 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 STAT1P42224 750 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 DPP6P42658 865 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 NME3Q13232 169 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 NUMA1Q14980 2115 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 FAM102AQ5T9C2 384 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 NAA35Q5VZE5 725 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 LYSMD4Q5XG99 296 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 TRNP1Q6NT89 227 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 FBXL22Q6P050 247 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 MMS22LQ6ZRQ5 1243 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 SYT12Q8IV01 421 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 SLC41A1Q8IVJ1 513 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 DHX40Q8IX18 779 aaKnown RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 ZNF366Q8N895 744 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 NEK11Q8NG66 645 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 OR2T3Q8NH03 318 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 PRCCQ92733 491 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 SIPA1Q96FS4 1042 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 MRGPRX3Q96LB0 322 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 SPAG5Q96R06 1193 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 PIGVQ9NUD9 493 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 KIAA1522Q9P206 1035 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 EVLQ9UI08 416 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-213ENST00000460048 TMEM59LQ9UK28 342 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 PILRBQ9UKJ0 227 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 STAP1Q9ULZ2 295 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
SHANK2-213ENST00000460048 LNP1A1A4G5 178 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 FAM170AA1A519 330 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 DCDC2BA2VCK2 349 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 H0Y626 953 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 TM4SF5O14894 197 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 KHNYNO15037 678 aaKnown RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ITPKAP23677 461 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 CD6P30203 668 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 FLT3P36888 993 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 CXCR3P49682 368 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 SULT1E1P49888 294 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ZNF33AQ06730 810 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 SLC25A52Q3SY17 297 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 PITRM1Q5JRX3 1037 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 BRMS1LQ5PSV4 323 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ARCQ7LC44 396 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 BNIPLQ7Z465 357 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 CCDC117Q8IWD4 279 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 DEFB119Q8N690 84 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 KDM1BQ8NB78 822 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 MSANTD4Q8NCY6 345 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 IGSF8Q969P0 613 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ZNF419Q96HQ0 510 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 FUCA2Q9BTY2 467 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 FBRSQ9HAH7 460 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 PRSS16Q9NQE7 514 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ANLNQ9NQW6 1124 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 WSB2Q9NYS7 404 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-213ENST00000460048 SUN2Q9UH99 717 aa17.03■□□□□ 0.32
SHANK2-213ENST00000460048 HS3ST4Q9Y661 456 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms