RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SLC13A1Q9BZW2 595 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 IL22Q9GZX6 179 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 GBA3Q9H227 469 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 XPNPEP3Q9NQH7 507 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 FBXO6Q9NRD1 293 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 NDE1Q9NXR1 346 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 TAS2R1Q9NYW7 299 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 HACD3Q9P035 362 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 KLHL8Q9P2G9 620 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PIN4Q9Y237 131 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PLXNB2O15031 1838 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 WDR27A2RRH5 827 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 B2RBV5 119 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 M0QYT0 321 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 M0QZ92 97 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PIK3R2O00459 728 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 TPP1O14773 563 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 DCLK1O15075 740 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SLC34A2O95436 690 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SNAI1O95863 264 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 C6orf222P0C671 652 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 COL6A2P12110 1019 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 VAV1P15498 845 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PTPN1P18031 435 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 AMPD1P23109 780 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 TYK2P29597 1187 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 EPHX2P34913 555 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 MAGEA12P43365 314 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SLC1A6P48664 564 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 HARS2P49590 506 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CLCN2P51788 898 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 COPAP53621 1224 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 LIMK2P53671 638 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 ACTR3P61158 418 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PPIDQ08752 370 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SLC10A2Q12908 348 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 BMPR2Q13873 1038 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 HIC1Q14526 733 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 MFSD10Q14728 455 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SNX17Q15036 470 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CFAP157Q5JU67 520 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 N4BP2L1Q5TBK1 243 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CAPRIN2Q6IMN6 1127 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 TRMT10BQ6PF06 316 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CDHR3Q6ZTQ4 885 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 FAM131BQ86XD5 332 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 LRRC49Q8IUZ0 686 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC33Q8N5R6 958 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC185Q8N715 623 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CCNYQ8ND76 341 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 NR1H4Q96RI1 486 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PPP1R16BQ96T49 567 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 RBBP8Q99708 897 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 EIF2AQ9BY44 585 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 B3GNT5Q9BYG0 378 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 ADAM33Q9BZ11 813 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 FAM49AQ9H0Q0 323 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 NXF3Q9H4D5 531 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PLAC1Q9HBJ0 212 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SMYD2Q9NRG4 433 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SPATS2LQ9NUQ6 558 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 SETD4Q9NVD3 440 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 COPG2Q9UBF2 871 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CDH9Q9ULB4 789 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 VANGL2Q9ULK5 521 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 AAR2Q9Y312 384 aaKnown RBP9.07□□□□□ -0.96
HDAC3-202ENST00000459727 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
HDAC3-202ENST00000459727 CITO14578 2027 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CCL15-CCL14A0A0B4J2E2 113 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 HAS3O00219 553 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CYB561D2O14569 222 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 GABRDO14764 452 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ENTPD5O75356 428 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 GABBR2O75899 941 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PROCP04070 461 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ALDOAP04075 364 aaKnown RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ENO1P06733 434 aaKnown RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 RALBP11234 206 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CPA3P15088 417 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 MGAT1P26572 445 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 RPL9P32969 192 aaKnown RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ADRA1BP35368 520 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SERPINB5P36952 375 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 LILRA4P59901 499 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ABCE1P61221 599 aaKnown RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 GALNT2Q10471 571 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PDE1CQ14123 709 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 MAPRE1Q15691 268 aaKnown RBP9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CCL15Q16663 113 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SNX30Q5VWJ9 437 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PDPK2PQ6A1A2 396 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 RINLQ6ZS11 566 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PID1Q7Z2X4 250 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms