RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 FARP1Q9Y4F1 1045 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-204ENST00000459639 IGLV3-10A0A075B6K4 115 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 C5orf60A6NFR6 353 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 SMAPO00193 183 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 GCATO75600 419 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 CSPG5O95196 566 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 VAV1P15498 845 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 CAMK1Q14012 370 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 CEP128Q6ZU80 1094 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 HOOK3Q86VS8 718 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 PPIL6Q8IXY8 311 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 RTL3Q8N8U3 475 aaKnown RBP25.13■■□□□ 1.61
U2AF1-204ENST00000459639 HDAC11Q96DB2 347 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 PRMT1Q99873 361 aaKnown RBP25.13■■□□□ 1.61
U2AF1-204ENST00000459639 KLC2Q9H0B6 622 aa25.13■■□□□ 1.61
U2AF1-204ENST00000459639 C2orf78A6NCI8 922 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 CCDC85CA6NKD9 419 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 KCNQ1P51787 676 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 NRLP54845 237 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 PPIDQ08752 370 aaKnown RBP25.12■■□□□ 1.61
U2AF1-204ENST00000459639 ALS2CLQ60I27 953 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 TMC8Q8IU68 726 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 ZCCHC9Q8N567 271 aaKnown RBP25.12■■□□□ 1.61
U2AF1-204ENST00000459639 LRRN4Q8WUT4 740 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 CPT1BQ92523 772 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 LRRC3Q9BY71 257 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 FAM53CQ9NYF3 392 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 VANGL2Q9ULK5 521 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 ATP8A1Q9Y2Q0 1164 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 NUP205Q92621 2012 aa25.12■■□□□ 1.61
U2AF1-204ENST00000459639 STK10O94804 968 aaKnown RBP25.11■■□□□ 1.61
U2AF1-204ENST00000459639 IRS1P35568 1242 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 HSD17B3P37058 310 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 HARS2P49590 506 aaKnown RBP25.11■■□□□ 1.61
U2AF1-204ENST00000459639 AP1B1Q10567 949 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 PPM1LQ5SGD2 360 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 RAP1GAP2Q684P5 730 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 CCNYQ8ND76 341 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 PRCCQ92733 491 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-204ENST00000459639 AZIN2Q96A70 460 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 KLF16Q9BXK1 252 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-204ENST00000459639 ZYG11BQ9C0D3 744 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 DONSONQ9NYP3 566 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 SHROOM3Q8TF72 1996 aa25.11■■□□□ 1.61
U2AF1-204ENST00000459639 H3BNC9 293 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 OLFM2O95897 454 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 RHOQP17081 205 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 GARSP41250 739 aaKnown RBP25.1■■□□□ 1.61
U2AF1-204ENST00000459639 PMS2P54278 862 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 ZNF33AQ06730 810 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 UAP1Q16222 522 aaPredicted RBP25.1■■□□□ 1.61
U2AF1-204ENST00000459639 CFAP58Q5T655 872 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 NADSYN1Q6IA69 706 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 NLRP14Q86W24 1093 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 CHSY1Q86X52 802 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 TP53INP2Q8IXH6 220 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 NETO2Q8NC67 525 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 P2RY11Q96G91 374 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 RNF38Q9H0F5 515 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 YBX2Q9Y2T7 364 aaKnown RBP25.1■■□□□ 1.61
U2AF1-204ENST00000459639 ATG2AQ2TAZ0 1938 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 A0A0A0MRY4 1105 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 GOLGA6BA6NDN3 693 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 MTSS1O43312 755 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 ACSL4O60488 711 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 GABRR2P28476 465 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 CHKAP35790 457 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 SLC11A2P49281 568 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 BASP1P80723 227 aaKnown RBP25.1■■□□□ 1.61
U2AF1-204ENST00000459639 GPM6BQ13491 265 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 FBXL22Q6P050 247 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 NAT8LQ8N9F0 302 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 CCDC110Q8TBZ0 833 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 UBLCP1Q8WVY7 318 aaPredicted RBP25.1■■□□□ 1.61
U2AF1-204ENST00000459639 SPATA13Q96N96 652 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 TMEM248Q9NWD8 314 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 MPP6Q9NZW5 540 aa25.1■■□□□ 1.61
U2AF1-204ENST00000459639 DRGXA6NNA5 263 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 STC2O76061 302 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 TACR2P21452 398 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 CDC25CP30307 473 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 GPS2Q13227 327 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 AFMIDQ63HM1 303 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 CCDC25Q86WR0 208 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 IQCKQ8N0W5 287 aa25.09■■□□□ 1.61
U2AF1-204ENST00000459639 MRPS31Q92665 395 aaKnown RBP25.09■■□□□ 1.61
U2AF1-204ENST00000459639 NYNRINQ9P2P1 1898 aaKnown RBP25.09■■□□□ 1.61
U2AF1-204ENST00000459639 RNF103O00237 685 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 CHADO15335 359 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 OPHN1O60890 802 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 CLASP2O75122 1294 aaKnown RBP25.08■■□□□ 1.61
U2AF1-204ENST00000459639 MBL2P11226 248 aaPredicted RBP25.08■■□□□ 1.61
U2AF1-204ENST00000459639 HOXA9P31269 272 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 GAREM2Q75VX8 874 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 ARHGAP12Q8IWW6 846 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 HS6ST3Q8IZP7 471 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 CELF6Q96J87 481 aaKnown RBP25.08■■□□□ 1.61
U2AF1-204ENST00000459639 GCNAQ96QF7 691 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 PHACTR1Q9C0D0 580 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 PABPC3Q9H361 631 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms