RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 NOMO3P69849 1222 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 SLC12A1Q13621 1099 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 SKOR2Q2VWA4 1001 aaPredicted RBP18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 SLC25A52Q3SY17 297 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 KIAA1324Q6UXG2 1013 aaKnown RBP18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 ARCQ7LC44 396 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 METTL3Q86U44 580 aaKnown RBP18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 CPA5Q8WXQ8 436 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 MRGPRX1Q96LB2 322 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 PRICKLE1Q96MT3 831 aaPredicted RBP18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 WDCPQ9H6R7 721 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 SUN2Q9UH99 717 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 MYO6Q9UM54 1294 aa18.12■□□□□ 0.49
SCARNA2-201ENST00000458748 WASH3PC4AMC7 463 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 NDUFS2O75306 463 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 FERP16591 822 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 OXTRP30559 389 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 RPL6Q02878 288 aaKnown RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 DEUP1Q05D60 604 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 FUT11Q495W5 492 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 PPM1JQ5JR12 505 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 RNF219Q5W0B1 726 aaPredicted RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 TMEM215Q68D42 235 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 PPP1R2P3Q6NXS1 205 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 ADIPOR2Q86V24 386 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 DHX40Q8IX18 779 aaKnown RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 PRCCQ92733 491 aaPredicted RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 PGAP3Q96FM1 320 aaPredicted RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 NPY6RQ99463 290 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 HSD3B7Q9H2F3 369 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 RTN4Q9NQC3 1192 aaKnown RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 RXFP3Q9NSD7 469 aa18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 TPRP12270 2363 aaKnown RBP18.11■□□□□ 0.49
SCARNA2-201ENST00000458748 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 A0A1B0GVM2 712 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SYCE3A1L190 88 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 TCAF2A6NFQ2 919 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 GOLGA8SH3BPF8 625 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 KHNYNO15037 678 aaKnown RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 EPHB6O15197 1021 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SERPINC1P01008 464 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 CYP1A1P04798 512 aaPredicted RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 CALB1P05937 261 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 KCNA4P22459 653 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 MMP8P22894 467 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 CD70P32970 193 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 HOXD12P35452 270 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 NNMTP40261 264 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 PITX1P78337 314 aaPredicted RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SULT2A1Q06520 285 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SFSWAPQ12872 951 aaKnown RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 LYSMD4Q5XG99 296 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 LRRC31Q6UY01 552 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 APTXQ7Z2E3 356 aaKnown RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 RABEPKQ7Z6M1 372 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 FRMD1Q8N878 549 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 KDM1BQ8NB78 822 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 CYB5D2Q8WUJ1 264 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SLC20A1Q8WUM9 679 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SORCS1Q8WY21 1168 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 TTC17Q96AE7 1141 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SIPA1Q96FS4 1042 aa18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 RPRD1AQ96P16 312 aaPredicted RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 SEPT11Q9NVA2 429 aaKnown RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 XPO7Q9UIA9 1087 aaKnown RBP18.1■□□□□ 0.49
SCARNA2-201ENST00000458748 LAMA1P25391 3075 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 IGHV1OR15-9A0A0B4J2B8 117 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 GOLGA6L19H0YKK7 550 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 SRPRAP08240 638 aaKnown RBP18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 DESP17661 470 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 PRKCHP24723 683 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 CXCR3P49682 368 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 FMO1Q01740 532 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 LMAN2Q12907 356 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 MMS22LQ6ZRQ5 1243 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 TMPRSS6Q8IU80 811 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 SYT12Q8IV01 421 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 OR2T3Q8NH03 318 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 NT5C3BQ969T7 300 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 CNTNAP3BQ96NU0 1288 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 PRMT1Q99873 361 aaKnown RBP18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 CNTNAP3Q9BZ76 1288 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 TKTL2Q9H0I9 626 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 TMEM245Q9H330 911 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 EVLQ9UI08 416 aaPredicted RBP18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 CYP8B1Q9UNU6 501 aa18.09■□□□□ 0.49
SCARNA2-201ENST00000458748 CNOT1A5YKK6 2376 aaKnown RBP18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 A0A1W2PQC6 194 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 ANKRD62A6NC57 917 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 RNASEH1O60930 286 aaKnown RBP18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 PAGE1O75459 146 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 CLDN11O75508 207 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 C7P10643 843 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 SDC4P31431 198 aa18.08■□□□□ 0.48
SCARNA2-201ENST00000458748 CSKP41240 450 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms