RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 VN1R3Q9BXE9 311 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 NDFIP2Q9NV92 336 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 IL37Q9NZH6 218 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 STK10O94804 968 aaKnown RBP16.81■□□□□ 0.28
CAPN13-203ENST00000458085 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
CAPN13-203ENST00000458085 DRD4P21917 467 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 GARSP41250 739 aaKnown RBP16.81■□□□□ 0.28
CAPN13-203ENST00000458085 CRADDP78560 199 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 DUSP4Q13115 394 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 SPARCL1Q14515 664 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 KLHL38Q2WGJ6 581 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 MANEALQ5VSG8 457 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 PDZD4Q76G19 769 aaPredicted RBP16.81■□□□□ 0.28
CAPN13-203ENST00000458085 LRRC43Q8N309 656 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 MZB1Q8WU39 189 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 HDAC11Q96DB2 347 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 TTPALQ9BTX7 342 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 BEGAINQ9BUH8 593 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 TRABDQ9H4I3 376 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 FBXO44Q9H4M3 255 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 KLHL8Q9P2G9 620 aaPredicted RBP16.81■□□□□ 0.28
CAPN13-203ENST00000458085 ACTL7BQ9Y614 415 aa16.81■□□□□ 0.28
CAPN13-203ENST00000458085 CXorf49A8MYA2 514 aaPredicted RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ATP2A2P16615 1042 aaKnown RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CD68P34810 354 aaPredicted RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 RASA2Q15283 850 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 RASIP1Q5U651 963 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 UNC5AQ6ZN44 842 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 GDAP1Q8TB36 358 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 DPF3Q92784 378 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CYTH2Q99418 400 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 SMYD2Q9NRG4 433 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 FETUBQ9UGM5 382 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 TBX21Q9UL17 535 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 MAD1L1Q9Y6D9 718 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CDY1Q9Y6F8 540 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 FAM92AA1XBS5 289 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ZBTB24O43167 697 aaPredicted RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 FAM155BO75949 473 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 YWHAQP27348 245 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 MSH2P43246 934 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ZNF135P52742 658 aaPredicted RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 TAF10Q12962 218 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 PPP2R5DQ14738 602 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ARHGAP12Q8IWW6 846 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 ZSCAN18Q8TBC5 510 aaPredicted RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 GIPC2Q8TF65 315 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 FBXO32Q969P5 355 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CHMP6Q96FZ7 201 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 EBNA1BP2Q99848 306 aaKnown RBP16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CWH43Q9H720 699 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 MPP6Q9NZW5 540 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
CAPN13-203ENST00000458085 CPP00450 1065 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 HAPLN1P10915 354 aaPredicted RBP16.79■□□□□ 0.28
CAPN13-203ENST00000458085 HOXC13P31276 330 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SERPINB6P35237 376 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 EFEMP1Q12805 493 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 PIK3R6Q5UE93 754 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 MSANTD2Q6P1R3 559 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 LRRC34Q8IZ02 419 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SLC39A13Q96H72 371 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SERPINB11Q96P15 392 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 CCDC134Q9H6E4 229 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 PPCSQ9HAB8 311 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 WDR27A2RRH5 827 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 NCAM2O15394 837 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 UGT1A9O60656 530 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 EFEMP2O95967 443 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 MX2P20592 715 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 WDR4P57081 412 aaKnown RBP16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SF3A3Q12874 501 aaKnown RBP eCLIP16.79■□□□□ 0.28
CAPN13-203ENST00000458085 ELAVL2Q12926 359 aaKnown RBP16.79■□□□□ 0.28
CAPN13-203ENST00000458085 NR1H3Q13133 447 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 ANKS3Q6ZW76 656 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SPPL2BQ8TCT7 592 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 SLC44A1Q8WWI5 657 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 UGT1A7Q9HAW7 530 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 UGT1A10Q9HAW8 530 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 UGT1A8Q9HAW9 530 aa16.79■□□□□ 0.28
CAPN13-203ENST00000458085 XAB2Q9HCS7 855 aaKnown RBP16.79■□□□□ 0.28
CAPN13-203ENST00000458085 DFFAO00273 331 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 ATF6P18850 670 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 SESN2P58004 480 aaPredicted RBP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 TAX1BP1Q86VP1 789 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 UNC5BQ8IZJ1 945 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 FBXO22Q8NEZ5 403 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms