RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 MIPP30301 263 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CDH5P33151 784 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 FAPQ12884 760 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ANKRD20A2Q5SQ80 823 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ANKRD20A1Q5TYW2 823 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ANKRD20A3Q5VUR7 823 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 POLNQ7Z5Q5 900 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 LRRC6Q86X45 466 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 DCAKDQ8WVC6 231 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 TRAPPC12Q8WVT3 735 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 COG8Q96MW5 612 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ACSS3Q9H6R3 686 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 SPATA7Q9P0W8 599 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ZMYND8Q9ULU4 1186 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 WEE1P30291 646 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 EFNA5P52803 228 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 DPYSL3Q14195 570 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 FYB2Q5VWT5 728 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 XYLT1Q86Y38 959 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 AGGF1Q8N302 714 aaeCLIP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 LINC00469Q8N7U9 141 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 TWNKQ96RR1 684 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 HMGXB4Q9UGU5 601 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 SLC7A4O43246 635 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 CSDE1O75534 798 aaKnown RBP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 TNNC2P02585 160 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 ELK3P41970 407 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 FOXK2Q01167 660 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 SGCGQ13326 291 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 KLHL38Q2WGJ6 581 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 KDELC1Q6UW63 502 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 BANPQ8N9N5 519 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 MZB1Q8WU39 189 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 UBXN10Q96LJ8 280 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 C12orf42Q96LP6 360 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 SDCBP2Q9H190 292 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
SYNE2-207ENST00000458046 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
SYNE2-207ENST00000458046 ABLIM1O14639 778 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ENTPD5O75356 428 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 CXCL8P10145 99 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 PCNAP12004 261 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 GCLCP48506 637 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 RAD23BP54727 409 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 CRYMQ14894 314 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 MINDY4Q4G0A6 757 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 DARS2Q6PI48 645 aaKnown RBP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 NUP54Q7Z3B4 507 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ZBTB8OSQ8IWT0 167 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 SEPT1Q8WYJ6 367 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ANKRD36BP1Q96IX9 119 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 TRPV4Q9HBA0 871 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 C2orf71A6NGG8 1288 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 MCF2LO15068 1137 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 LPXNO60711 386 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 YWHAGP61981 247 aaKnown RBP eCLIP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 KBTBD12Q3ZCT8 623 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 IER5Q5VY09 327 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 CLNKQ7Z7G1 428 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ATCAYQ86WG3 371 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 HDAC2Q92769 488 aaKnown RBP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 INPP5DQ92835 1189 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 TTC17Q96AE7 1141 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 FAM111AQ96PZ2 611 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 LBHD1Q9BQE6 289 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 DHRS4Q9BTZ2 278 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 R3HDMLQ9H3Y0 253 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-207ENST00000458046 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 SH3BGRL2Q9UJC5 107 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
SYNE2-207ENST00000458046 ANGPTL3Q9Y5C1 460 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms