RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 UBE3AQ05086 875 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 MYO9BQ13459 2157 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 AUHQ13825 339 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 BYSLQ13895 437 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 PAFAH1B3Q15102 231 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 TEAD2Q15562 447 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 BRMS1LQ5PSV4 323 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 HECTD3Q5T447 861 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 SYCP2LQ5T4T6 812 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 FAXCQ5TGI0 409 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 PPP2R2DQ66LE6 453 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 FBXL22Q6P050 247 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 DRICH1Q6PGQ1 229 aaPredicted RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 MICALCLQ6ZW33 695 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 PACS2Q86VP3 889 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 PSTKQ8IV42 348 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 CCDC105Q8IYK2 499 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 AGGF1Q8N302 714 aaeCLIP9.01□□□□□ -0.97
RIF1-208ENST00000457745 FAM71DQ8N9W8 422 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ZSCAN18Q8TBC5 510 aaPredicted RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 MICAL1Q8TDZ2 1067 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 IFT81Q8WYA0 676 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 RNF34Q969K3 372 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 RSPRY1Q96DX4 576 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 CCDC114Q96M63 670 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ZSWIM3Q96MP5 696 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 QKIQ96PU8 341 aaKnown RBP eCLIP9.01□□□□□ -0.97
RIF1-208ENST00000457745 ERP44Q9BS26 406 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 APOL5Q9BWW9 433 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 SLC46A2Q9BY10 475 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TXLNGYQ9BZA5 131 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 OSBPL2Q9H1P3 480 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 EPB41L4BQ9H329 900 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TRPC7Q9HCX4 862 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 DNAJC17Q9NVM6 304 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 VANGL2Q9ULK5 521 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 CCL26Q9Y258 94 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ACTL7AQ9Y615 435 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TNRC18O15417 2968 aaPredicted RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 MYLKQ15746 1914 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 RANBP2P49792 3224 aaKnown RBP9□□□□□ -0.97
RIF1-208ENST00000457745 GFRA2O00451 464 aa9□□□□□ -0.97
RIF1-208ENST00000457745 TMEM63AO94886 807 aa9□□□□□ -0.97
RIF1-208ENST00000457745 ITGAVP06756 1048 aa9□□□□□ -0.97
RIF1-208ENST00000457745 BMP1P13497 986 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CEBPBP17676 345 aa9□□□□□ -0.97
RIF1-208ENST00000457745 TACR2P21452 398 aa9□□□□□ -0.97
RIF1-208ENST00000457745 TGM2P21980 687 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CCR1P32246 355 aa9□□□□□ -0.97
RIF1-208ENST00000457745 NRIP1P48552 1158 aa9□□□□□ -0.97
RIF1-208ENST00000457745 EPHA5P54756 1037 aa9□□□□□ -0.97
RIF1-208ENST00000457745 MLLT6P55198 1093 aaPredicted RBP9□□□□□ -0.97
RIF1-208ENST00000457745 PRSS12P56730 875 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CREMQ03060 361 aa9□□□□□ -0.97
RIF1-208ENST00000457745 WASHC5Q12768 1159 aa9□□□□□ -0.97
RIF1-208ENST00000457745 ZBTB17Q13105 803 aa9□□□□□ -0.97
RIF1-208ENST00000457745 NNTQ13423 1086 aa9□□□□□ -0.97
RIF1-208ENST00000457745 MTM1Q13496 603 aa9□□□□□ -0.97
RIF1-208ENST00000457745 OLIG2Q13516 323 aa9□□□□□ -0.97
RIF1-208ENST00000457745 DHX34Q14147 1143 aaKnown RBP9□□□□□ -0.97
RIF1-208ENST00000457745 IHHQ14623 411 aa9□□□□□ -0.97
RIF1-208ENST00000457745 PRKD1Q15139 912 aaPredicted RBP9□□□□□ -0.97
RIF1-208ENST00000457745 UAP1Q16222 522 aaPredicted RBP9□□□□□ -0.97
RIF1-208ENST00000457745 DUSP6Q16828 381 aa9□□□□□ -0.97
RIF1-208ENST00000457745 GLE1Q53GS7 698 aaKnown RBP9□□□□□ -0.97
RIF1-208ENST00000457745 PRSS36Q5K4E3 855 aa9□□□□□ -0.97
RIF1-208ENST00000457745 PPM1LQ5SGD2 360 aa9□□□□□ -0.97
RIF1-208ENST00000457745 AFMIDQ63HM1 303 aa9□□□□□ -0.97
RIF1-208ENST00000457745 TFAP2DQ7Z6R9 452 aa9□□□□□ -0.97
RIF1-208ENST00000457745 VSIG1Q86XK7 387 aa9□□□□□ -0.97
RIF1-208ENST00000457745 DENND1CQ8IV53 801 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CFAP52Q8N1V2 620 aa9□□□□□ -0.97
RIF1-208ENST00000457745 ARHGAP18Q8N392 663 aa9□□□□□ -0.97
RIF1-208ENST00000457745 ITFG1Q8TB96 612 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CCDC110Q8TBZ0 833 aa9□□□□□ -0.97
RIF1-208ENST00000457745 FBXO25Q8TCJ0 367 aa9□□□□□ -0.97
RIF1-208ENST00000457745 WFDC5Q8TCV5 224 aa9□□□□□ -0.97
RIF1-208ENST00000457745 UBE2Q2Q8WVN8 375 aa9□□□□□ -0.97
RIF1-208ENST00000457745 ING5Q8WYH8 240 aa9□□□□□ -0.97
RIF1-208ENST00000457745 OVCA2Q8WZ82 227 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CEP295NLQ96MC4 621 aa9□□□□□ -0.97
RIF1-208ENST00000457745 LRRC3BQ96PB8 259 aa9□□□□□ -0.97
RIF1-208ENST00000457745 HAPLN3Q96S86 360 aa9□□□□□ -0.97
RIF1-208ENST00000457745 NAP1L3Q99457 506 aaPredicted RBP9□□□□□ -0.97
RIF1-208ENST00000457745 EMILIN2Q9BXX0 1053 aa9□□□□□ -0.97
RIF1-208ENST00000457745 SLC39A8Q9C0K1 460 aa9□□□□□ -0.97
RIF1-208ENST00000457745 PRDM12Q9H4Q4 367 aa9□□□□□ -0.97
RIF1-208ENST00000457745 TRPM5Q9NZQ8 1165 aa9□□□□□ -0.97
RIF1-208ENST00000457745 RCOR3Q9P2K3 495 aaPredicted RBP9□□□□□ -0.97
RIF1-208ENST00000457745 CLEC4EQ9ULY5 219 aa9□□□□□ -0.97
RIF1-208ENST00000457745 CPQQ9Y646 472 aa9□□□□□ -0.97
RIF1-208ENST00000457745 PRRC2BQ5JSZ5 2229 aaKnown RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 IGLV3-10A0A075B6K4 115 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 H7C0C1 242 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 SOX1O00570 391 aaPredicted RBP8.99□□□□□ -0.97
RIF1-208ENST00000457745 TSPAN3O60637 253 aa8.99□□□□□ -0.97
RIF1-208ENST00000457745 GJB3O75712 270 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 857.7 ms