RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TRIM62Q9BVG3 475 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 NMUR1Q9HB89 426 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 TMEM161AQ9NX61 479 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 COPEO14579 308 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 CA8P35219 290 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 CXCR3P49682 368 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ZNF280DQ6N043 979 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 TFAP2DQ7Z6R9 452 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 DCAKDQ8WVC6 231 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 FBXO32Q969P5 355 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 FCRL2Q96LA5 508 aaPredicted RBP14.03□□□□□ -0.16
CLK3-203ENST00000454830 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 OLFM3Q96PB7 478 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 FAM111AQ96PZ2 611 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
CLK3-203ENST00000454830 BEGAINQ9BUH8 593 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ARHGAP42A6NI28 874 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SDR42E2A6NKP2 422 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 DCLK1O15075 740 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ZBTB24O43167 697 aaPredicted RBP14.03□□□□□ -0.16
CLK3-203ENST00000454830 NBNO60934 754 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 TPH1P17752 444 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 APLP1P51693 650 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 GSDMBQ8TAX9 411 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SLCO1B3Q9NPD5 702 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SLC17A6Q9P2U8 582 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
CLK3-203ENST00000454830 E2F8A0AVK6 867 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 ENPP3O14638 875 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 FOXN2P32314 431 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 ITKQ08881 620 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 MTFR1Q15390 333 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 PARP6Q2NL67 630 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 C10orf120Q5SQS8 335 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 SPATA21Q7Z572 469 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 CDKL2Q92772 493 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 GMIPQ9P107 970 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 RPS6KL1Q9Y6S9 549 aa14.02□□□□□ -0.16
CLK3-203ENST00000454830 KRT38O76015 456 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 TBX18O95935 607 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 NFKB1P19838 968 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 TPSB2P20231 275 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 TUBP50607 506 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 WASHC5Q12768 1159 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 SEMA5AQ13591 1074 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 TPSAB1Q15661 275 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 NUP93Q8N1F7 819 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 MCUQ8NE86 351 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 SLC44A1Q8WWI5 657 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 PCMTD2Q9NV79 361 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 SLC17A7Q9P2U7 560 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 VANGL2Q9ULK5 521 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.17
CLK3-203ENST00000454830 IRAK2O43187 625 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 SNRPAP09012 282 aaKnown RBP14.02□□□□□ -0.17
CLK3-203ENST00000454830 PTPN3P26045 913 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 AIF1P55008 147 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 PDE1BQ01064 536 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 PAFAH1B3Q15102 231 aaKnown RBP14.02□□□□□ -0.17
CLK3-203ENST00000454830 TTC39BQ5VTQ0 682 aaPredicted RBP14.02□□□□□ -0.17
CLK3-203ENST00000454830 PM20D1Q6GTS8 502 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 RASSF4Q9H2L5 321 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 EURLQ9NYK6 297 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 BFARQ9NZS9 450 aa14.02□□□□□ -0.17
CLK3-203ENST00000454830 USP15Q9Y4E8 981 aaPredicted RBP14.02□□□□□ -0.17
CLK3-203ENST00000454830 ZNF669Q96BR6 464 aaPredicted RBP14.01□□□□□ -0.17
CLK3-203ENST00000454830 SERAC1Q96JX3 654 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 SIGLEC10Q96LC7 697 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 PHACTR1Q9C0D0 580 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 SYBUQ9NX95 663 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 CSPG5O95196 566 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 PRPSAP1Q14558 356 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 PRKD1Q15139 912 aaPredicted RBP14.01□□□□□ -0.17
CLK3-203ENST00000454830 TAF12Q16514 161 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 TET1Q8NFU7 2136 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 CSH1P0DML2 217 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 CSH2P0DML3 217 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 SLC11A1P49279 550 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 GLUD2P49448 558 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 DSC1Q08554 894 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 DUSP4Q13115 394 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 ITPRIPL1Q6GPH6 555 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 PRSS55Q6UWB4 352 aaPredicted RBP14.01□□□□□ -0.17
CLK3-203ENST00000454830 BHLHA9Q7RTU4 235 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 ZFATQ9P243 1243 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 PCDH10Q9P2E7 1040 aa14.01□□□□□ -0.17
CLK3-203ENST00000454830 CCDC195A0A1B0GUA6 201 aa14□□□□□ -0.17
CLK3-203ENST00000454830 NCAM2O15394 837 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SNX3O60493 162 aa14□□□□□ -0.17
CLK3-203ENST00000454830 F7P08709 466 aaPredicted RBP14□□□□□ -0.17
CLK3-203ENST00000454830 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms