RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 RALBP11234 206 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NCF1P14598 390 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 THPOP40225 353 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 CSE1LP55060 971 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 RNF220Q5VTB9 566 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 CWF19L1Q69YN2 538 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 MTHFD1LQ6UB35 978 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 ARFGAP1Q8N6T3 406 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 GSTCDQ8NEC7 633 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 ALKBH8Q96BT7 664 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 FOXP3Q9BZS1 431 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SPC25Q9HBM1 224 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SYBUQ9NX95 663 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 MFSD11O43934 449 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 PMLP29590 882 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 BRCC3P46736 316 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NAGLUP54802 743 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 OASLQ15646 514 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 KIF19Q2TAC6 998 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SYPL2Q5VXT5 272 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 RHBDF2Q6PJF5 856 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 IZUMO2Q6UXV1 221 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 RINLQ6ZS11 566 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 HFE2Q6ZVN8 426 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 METTL23Q86XA0 190 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 AGAP2Q99490 1192 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NIFKQ9BYG3 293 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 RTN3O95197 1032 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 PAEPP09466 180 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 MCF2P10911 925 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NELFEP18615 380 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 SLC1A6P48664 564 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 RTP1P59025 263 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 ZNF484Q5JVG2 852 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NANOGNBQ7Z5D8 188 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 C10orf107Q8IVU9 208 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SCUBE1Q8IWY4 988 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SPATA22Q8NHS9 363 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SLC35B2Q8TB61 432 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 P2RY11Q96G91 374 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NDNQ99608 321 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 BTBD10Q9BSF8 475 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 SFMBT1Q9UHJ3 866 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 UBQLN1Q9UMX0 589 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 SBF1O95248 1867 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 STBD1O95210 358 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ETS2P15036 469 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ERCC2P18074 760 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 EPHA3P29320 983 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 RAB27AP51159 221 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 BCAT1P54687 386 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 PRAMEP78395 509 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 BST2Q10589 180 aaKnown RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CSHL1Q14406 222 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ZNF560Q96MR9 790 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 EPAS1Q99814 870 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 A0A096LPK6 155 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDR1-240ENST00000454612 CACNA2D1P54289 1103 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 IYDQ6PHW0 289 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 TKTL2Q9H0I9 626 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ASB7Q9H672 318 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CHRAC1Q9NRG0 131 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 MPP6Q9NZW5 540 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ABT1Q9ULW3 272 aaKnown RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 STARD13Q9Y3M8 1113 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 C3orf70A6NLC5 250 aaPredicted RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 B4GALT4O60513 344 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CPA3P15088 417 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CALB2P22676 271 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CCR10P46092 362 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 OR1G1P47890 313 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 ZNF157P51786 506 aaPredicted RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 IL1RL1Q01638 556 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 PDK1Q15118 436 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 NOMO1Q15155 1222 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 RALGPS1Q5JS13 557 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 SLC27A1Q6PCB7 646 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 TSHZ1Q6ZSZ6 1077 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 RPS27LQ71UM5 84 aaKnown RBP11.44□□□□□ -0.58
DDR1-240ENST00000454612 STK32AQ8WU08 396 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 CSPG4P5Q96PW8 444 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 RNPEPL1Q9HAU8 725 aa11.44□□□□□ -0.58
DDR1-240ENST00000454612 UTP6Q9NYH9 597 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms