RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 CAPN9O14815 690 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 TM4SF5O14894 197 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 NDUFA10O95299 355 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 IPO7O95373 1038 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 CFIP05156 583 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 EPHX1P07099 455 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 PLEKP08567 350 aaPredicted RBP18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 EIF4A3P38919 411 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 ZNF234Q14588 700 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 DENND1BQ6P3S1 775 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 SERPINA13PQ6UXR4 307 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 KIAA1524Q8TCG1 905 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 SORCS1Q8WY21 1168 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 SERPINB11Q96P15 392 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 SYT11Q9BT88 431 aa18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 EPN1Q9Y6I3 576 aaPredicted RBP18.68■□□□□ 0.58
SQSTM1-204ENST00000453046 EIF3CLB5ME19 914 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 CCP110O43303 1012 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 AKR1B10O60218 316 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 ACSL4O60488 711 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 TBL1XO60907 577 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 PTK2Q05397 1052 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 RING1Q06587 406 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 UAP1L1Q3KQV9 507 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 RFWD3Q6PCD5 774 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 ZNF571Q7Z3V5 609 aaPredicted RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 ZNF677Q86XU0 584 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 CEP76Q8TAP6 659 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 WFIKKN2Q8TEU8 576 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 STK32AQ8WU08 396 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 EIF3CQ99613 913 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 DDX50Q9BQ39 737 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 TRIM62Q9BVG3 475 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 KCND1Q9NSA2 647 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 ABCB8Q9NUT2 735 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 GGA2Q9UJY4 613 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 NOCTQ9UK39 431 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 PILRBQ9UKJ0 227 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 PLA2G4CQ9UP65 541 aa18.67■□□□□ 0.58
SQSTM1-204ENST00000453046 GOLGA6L7A0A1B0GV03 622 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 TYW5A2RUC4 315 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 IRAK2O43187 625 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 KCNK5O95279 499 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 LCA5LO95447 670 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 IGLV3-27P01718 113 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 CCDC175P0C221 793 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 ACADMP11310 421 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 CYP11B1P15538 503 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 HLA-FP30511 346 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 HOXD12P35452 270 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 CLCN1P35523 988 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 ATXN3P54252 364 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 ENPP2Q13822 863 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 DUOXA1Q1HG43 343 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 PIK3R6Q5UE93 754 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 TMEM215Q68D42 235 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 SLC23A3Q6PIS1 610 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 RABEPKQ7Z6M1 372 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 TMPRSS6Q8IU80 811 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 CCDC117Q8IWD4 279 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 RGL4Q8IZJ4 473 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 AHI1Q8N157 1196 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 DQX1Q8TE96 717 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 PRCCQ92733 491 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 SIPA1Q96FS4 1042 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 HSPA12BQ96MM6 686 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 MKRN2Q9H000 416 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 ACP6Q9NPH0 428 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 NAALADL1Q9UQQ1 740 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 PLXND1Q9Y4D7 1925 aa18.66■□□□□ 0.58
SQSTM1-204ENST00000453046 E5RJQ4 531 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 CDX4O14627 284 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 FYNP06241 537 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 PABPC1P11940 636 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 CD6P30203 668 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 MAPK8P45983 427 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 RPL34P49207 117 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SGSHP51688 502 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SPA17Q15506 151 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SLC18A3Q16572 532 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 MPP7Q5T2T1 576 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SYCP2LQ5T4T6 812 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 N4BP2L1Q5TBK1 243 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 METTL3Q86U44 580 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SLC47A2Q86VL8 602 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 ZNF557Q8N988 423 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 ADAM32Q8TC27 787 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 FOXJ1Q92949 421 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 AZIN2Q96A70 460 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SLC4A5Q9BY07 1137 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 IRX2Q9BZI1 471 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 STIM2Q9P246 746 aa18.65■□□□□ 0.58
SQSTM1-204ENST00000453046 SLC6A14Q9UN76 642 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms