RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TOP3BO95985 862 aaKnown RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 JCHAINP01591 159 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 PPP2R5DQ14738 602 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 PM20D1Q6GTS8 502 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 CDHR3Q6ZTQ4 885 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 TTC9BQ8N6N2 239 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 CASP10Q92851 521 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 PCMTD2Q9NV79 361 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 DCTN4Q9UJW0 460 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 E2F8A0AVK6 867 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 KIF3CO14782 793 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 ATP9BO43861 1147 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 CABYRO75952 493 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 FSBPO95073 299 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 OAS1P00973 400 aaKnown RBP12.09□□□□□ -0.47
VTA1-203ENST00000452973 C1QAP02745 245 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 MAGEA3P43357 314 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 SEMA3BQ13214 749 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 ARHGAP36Q6ZRI8 547 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 PTPRN2Q92932 1015 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 UROC1Q96N76 676 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 PKMYT1Q99640 499 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 MECRQ9BV79 373 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 NMUR1Q9HB89 426 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 SHROOM3Q8TF72 1996 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 A0A1W2PQH9 124 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
VTA1-203ENST00000452973 TPH1P17752 444 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 MGAT5Q09328 741 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 FITM2Q8N6M3 262 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 ATAD1Q8NBU5 361 aa12.09□□□□□ -0.47
VTA1-203ENST00000452973 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
VTA1-203ENST00000452973 PAGE1O75459 146 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 ERVK-10P10266 1014 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 PRKCHP24723 683 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 SCAPQ12770 1279 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 FAM26DQ5JW98 314 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 MAP3K21Q5TCX8 1036 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 DBF4BQ8NFT6 615 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 ALKBH8Q96BT7 664 aaKnown RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 APOPT1Q96IL0 206 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 ACTR5Q9H9F9 607 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 PNPLA8Q9NP80 782 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 RRN3Q9NYV6 651 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 MPP6Q9NZW5 540 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 SLC27A5Q9Y2P5 690 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 RPS6KL1Q9Y6S9 549 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 CCDC195A0A1B0GUA6 201 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 KRT38O76015 456 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 NFKB1P19838 968 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 GARSP41250 739 aaKnown RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 NDUFAF2Q8N183 169 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 PGAP3Q96FM1 320 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 TM9SF1O15321 606 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 BGNP21810 368 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 SERPINB6P35237 376 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 AIF1P55008 147 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 LHX8Q68G74 356 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 LRRC8BQ6P9F7 803 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 SCD5Q86SK9 330 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 COLGALT2Q8IYK4 626 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 IRGQQ8WZA9 623 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 OXNAD1Q96HP4 312 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 FCRL2Q96LA5 508 aaPredicted RBP12.08□□□□□ -0.48
VTA1-203ENST00000452973 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 NDFIP2Q9NV92 336 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 OSER1Q9NX31 292 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 PSAT1Q9Y617 370 aa12.08□□□□□ -0.48
VTA1-203ENST00000452973 MOXD2PA6NHM9 499 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 EOMESO95936 686 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 ABCG1P45844 678 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 SLC18A1P54219 525 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms