RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CTTNBP2NLQ9P2B4 639 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 DKK4Q9UBT3 224 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SLC45A1Q9Y2W3 748 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SALL3Q9BXA9 1300 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 HEG1Q9ULI3 1381 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 COL11A2P13942 1736 aaPredicted RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 FER1L6Q2WGJ9 1857 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 TRGV11A0A075B6L2 103 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 PRAMEF33A0A0G2JMD5 474 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 A0A1W2PS29 197 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 H0Y3Z8 333 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 DCLK1O15075 740 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 FIBPO43427 364 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 PRAMEF10O60809 474 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 KRT38O76015 456 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 GFPT2O94808 682 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SUN1O94901 812 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 RASAL1O95294 804 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SERPINB2P05120 415 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 KCNA2P16389 499 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 KCNA3P22001 575 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 ADRA1BP35368 520 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 AARSP49588 968 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00393-202ENST00000452852 CCR5P51681 352 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 TLE2Q04725 743 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 MAPK7Q13164 816 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 MPP3Q13368 585 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SLC5A9Q2M3M2 681 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 BTBD16Q32M84 506 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 ZIK1Q3SY52 487 aaPredicted RBP4.85□□□□□ -1.63
LINC00393-202ENST00000452852 CD300EQ496F6 205 aaPredicted RBP4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SP5Q6BEB4 398 aaPredicted RBP4.85□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF280DQ6N043 979 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF790Q6PG37 636 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 USP17L6PQ6QN14 398 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 Q6ZNX1 250 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 C4orf50Q6ZRC1 276 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 CLNKQ7Z7G1 428 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 ERP27Q96DN0 273 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 LRIG1Q96JA1 1093 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 MESP1Q9BRJ9 268 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 PLEKHA5Q9HAU0 1116 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 XPNPEP3Q9NQH7 507 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 TBC1D22BQ9NU19 505 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 AASSQ9UDR5 926 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 POLG2Q9UHN1 485 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 HPSEQ9Y251 543 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 CARMIL3Q8ND23 1372 aa4.85□□□□□ -1.63
LINC00393-202ENST00000452852 CCDC195A0A1B0GUA6 201 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 TCERG1O14776 1098 aaKnown RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 RRP9O43818 475 aaKnown RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 PIAS2O75928 621 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 CHEK2O96017 543 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 PRKCBP05771 671 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 XRCC6P12956 609 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 PRKAR2BP31323 418 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 AKT1P31749 480 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 VIPR2P41587 438 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 TOB1P50616 345 aaPredicted RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ALDH18A1P54886 795 aaKnown RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 WNT3P56703 355 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 LILRA4P59901 499 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ACTR2P61160 394 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 KRT17Q04695 432 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 UBE3AQ05086 875 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 FPGSQ05932 587 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 PIGFQ07326 219 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 DYRK1AQ13627 763 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ATPAF1Q5TC12 328 aaPredicted RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ITPRIPL1Q6GPH6 555 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 GAS2L3Q86XJ1 694 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 RASGRP3Q8IV61 690 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 LNX2Q8N448 690 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 CEP70Q8NHQ1 597 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 SSH3Q8TE77 659 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 THAP4Q8WY91 577 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF622Q969S3 477 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 CHCHD6Q9BRQ6 235 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 AIFM2Q9BRQ8 373 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 SIK2Q9H0K1 926 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 TP63Q9H3D4 680 aaPredicted RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ZBTB26Q9HCK0 441 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 TMEM160Q9NX00 188 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 DNMT3BQ9UBC3 853 aaKnown RBP4.84□□□□□ -1.63
LINC00393-202ENST00000452852 ZNHIT2Q9UHR6 403 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 DAPP1Q9UN19 280 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms